Gene : Eucgr.F03586 E. grandis v2.0
Defline:  (1 of 1) PTHR33414:SF2 - PLASTID MOVEMENT IMPAIRED1 Genomic Order:  3194
Name:  ? Eucgr.F03586 Secondary Identifier:  ? PAC:32053989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03586 0.5kb upstream 0.5kb upstream 3208 true Chr06: 46783641-46786848 Eucalyptus grandis
Eucgr.F03586 0.5kb upstream 0.5kb upstream 500 false Chr06: 46786349-46786848 Eucalyptus grandis
Eucgr.F03586 0.5kb downstream 0.5kb downstream 3208 true Chr06: 46783141-46786348 Eucalyptus grandis
Eucgr.F03586 0.5kb downstream 0.5kb downstream 500 false Chr06: 46783141-46783640 Eucalyptus grandis
Eucgr.F03586 1.0kb upstream 1.0kb upstream 3708 true Chr06: 46783641-46787348 Eucalyptus grandis
Eucgr.F03586 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46786349-46787348 Eucalyptus grandis
Eucgr.F03586 1.0kb downstream 1.0kb downstream 3708 true Chr06: 46782641-46786348 Eucalyptus grandis
Eucgr.F03586 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46782641-46783640 Eucalyptus grandis
Eucgr.F03586 2.0kb upstream 2.0kb upstream 4708 true Chr06: 46783641-46788348 Eucalyptus grandis
Eucgr.F03586 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46786349-46788348 Eucalyptus grandis
Eucgr.F03586 2.0kb downstream 2.0kb downstream 4708 true Chr06: 46781641-46786348 Eucalyptus grandis
Eucgr.F03586 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46781641-46783640 Eucalyptus grandis
Eucgr.F03586 5.0kb upstream 5.0kb upstream 7708 true Chr06: 46783641-46791348 Eucalyptus grandis
Eucgr.F03586 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46786349-46791348 Eucalyptus grandis
Eucgr.F03586 5.0kb downstream 5.0kb downstream 7708 true Chr06: 46778641-46786348 Eucalyptus grandis
Eucgr.F03586 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46778641-46783640 Eucalyptus grandis
Eucgr.F03586 10.0kb upstream 10.0kb upstream 12708 true Chr06: 46783641-46796348 Eucalyptus grandis
Eucgr.F03586 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46786349-46796348 Eucalyptus grandis
Eucgr.F03586 10.0kb downstream 10.0kb downstream 12708 true Chr06: 46773641-46786348 Eucalyptus grandis
Eucgr.F03586 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46773641-46783640 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066768 5270 Rosid View MSA
123738803 5271 Pentapetalae View MSA
122793466 5272 Eudicot View MSA
122045060 5273 Angiosperm View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.8233 0.0 19.7079    
cufflinks 1.00887 0.0 2.71354   Low
cufflinks 6.46848 0.0 14.6599    
cufflinks 2.45988 0.0 6.04767    
cufflinks 1.25415 0.0 3.30504   Low
cufflinks 9.72971 0.0 21.6767   High

0 Strain