Gene : Eucgr.F03543 E. grandis v2.0
Defline:  (1 of 1) PTHR24096:SF186 - 4-COUMARATE--COA LIGASE-LIKE 2-RELATED Genomic Order:  3160
Name:  ? Eucgr.F03543 Secondary Identifier:  ? PAC:32057538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03543 0.5kb upstream 0.5kb upstream 5428 true Chr06: 46492064-46497491 Eucalyptus grandis
Eucgr.F03543 0.5kb upstream 0.5kb upstream 500 false Chr06: 46496992-46497491 Eucalyptus grandis
Eucgr.F03543 0.5kb downstream 0.5kb downstream 5428 true Chr06: 46491564-46496991 Eucalyptus grandis
Eucgr.F03543 0.5kb downstream 0.5kb downstream 500 false Chr06: 46491564-46492063 Eucalyptus grandis
Eucgr.F03543 1.0kb upstream 1.0kb upstream 5928 true Chr06: 46492064-46497991 Eucalyptus grandis
Eucgr.F03543 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46496992-46497991 Eucalyptus grandis
Eucgr.F03543 1.0kb downstream 1.0kb downstream 5928 true Chr06: 46491064-46496991 Eucalyptus grandis
Eucgr.F03543 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46491064-46492063 Eucalyptus grandis
Eucgr.F03543 2.0kb upstream 2.0kb upstream 6928 true Chr06: 46492064-46498991 Eucalyptus grandis
Eucgr.F03543 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46496992-46498991 Eucalyptus grandis
Eucgr.F03543 2.0kb downstream 2.0kb downstream 6928 true Chr06: 46490064-46496991 Eucalyptus grandis
Eucgr.F03543 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46490064-46492063 Eucalyptus grandis
Eucgr.F03543 5.0kb upstream 5.0kb upstream 9928 true Chr06: 46492064-46501991 Eucalyptus grandis
Eucgr.F03543 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46496992-46501991 Eucalyptus grandis
Eucgr.F03543 5.0kb downstream 5.0kb downstream 9928 true Chr06: 46487064-46496991 Eucalyptus grandis
Eucgr.F03543 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46487064-46492063 Eucalyptus grandis
Eucgr.F03543 10.0kb upstream 10.0kb upstream 14928 true Chr06: 46492064-46506991 Eucalyptus grandis
Eucgr.F03543 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46496992-46506991 Eucalyptus grandis
Eucgr.F03543 10.0kb downstream 10.0kb downstream 14928 true Chr06: 46482064-46496991 Eucalyptus grandis
Eucgr.F03543 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46482064-46492063 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062315 5270 Rosid View MSA
123736531 5271 Pentapetalae View MSA
122785928 5272 Eudicot View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.2464 0.0 100.451 High  
cufflinks 15.0152 0.0 33.683    
cufflinks 38.7248 0.0 90.1764 High  
cufflinks 10.16 0.0 23.4762   Low
cufflinks 10.5845 0.0 24.507   Low
cufflinks 37.6434 0.0 88.664 High  

0 Strain