Gene : Eucgr.F03537 E. grandis v2.0
Defline:  (1 of 2) PTHR11353:SF23 - T-COMPLEX PROTEIN 1 SUBUNIT BETA Genomic Order:  3154
Name:  ? Eucgr.F03537 Secondary Identifier:  ? PAC:32056724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03537 0.5kb upstream 0.5kb upstream 5654 true Chr06: 46464328-46469981 Eucalyptus grandis
Eucgr.F03537 0.5kb upstream 0.5kb upstream 500 false Chr06: 46469482-46469981 Eucalyptus grandis
Eucgr.F03537 0.5kb downstream 0.5kb downstream 5654 true Chr06: 46463828-46469481 Eucalyptus grandis
Eucgr.F03537 0.5kb downstream 0.5kb downstream 500 false Chr06: 46463828-46464327 Eucalyptus grandis
Eucgr.F03537 1.0kb upstream 1.0kb upstream 6154 true Chr06: 46464328-46470481 Eucalyptus grandis
Eucgr.F03537 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46469482-46470481 Eucalyptus grandis
Eucgr.F03537 1.0kb downstream 1.0kb downstream 6154 true Chr06: 46463328-46469481 Eucalyptus grandis
Eucgr.F03537 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46463328-46464327 Eucalyptus grandis
Eucgr.F03537 2.0kb upstream 2.0kb upstream 7154 true Chr06: 46464328-46471481 Eucalyptus grandis
Eucgr.F03537 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46469482-46471481 Eucalyptus grandis
Eucgr.F03537 2.0kb downstream 2.0kb downstream 7154 true Chr06: 46462328-46469481 Eucalyptus grandis
Eucgr.F03537 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46462328-46464327 Eucalyptus grandis
Eucgr.F03537 5.0kb upstream 5.0kb upstream 10154 true Chr06: 46464328-46474481 Eucalyptus grandis
Eucgr.F03537 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46469482-46474481 Eucalyptus grandis
Eucgr.F03537 5.0kb downstream 5.0kb downstream 10154 true Chr06: 46459328-46469481 Eucalyptus grandis
Eucgr.F03537 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46459328-46464327 Eucalyptus grandis
Eucgr.F03537 10.0kb upstream 10.0kb upstream 15154 true Chr06: 46464328-46479481 Eucalyptus grandis
Eucgr.F03537 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46469482-46479481 Eucalyptus grandis
Eucgr.F03537 10.0kb downstream 10.0kb downstream 15154 true Chr06: 46454328-46469481 Eucalyptus grandis
Eucgr.F03537 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46454328-46464327 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064073 5270 Rosid View MSA
123747286 5271 Pentapetalae View MSA
122790745 5272 Eudicot View MSA
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.0672 0.0 87.275 High  
cufflinks 31.9962 0.0 71.1497   Low
cufflinks 34.6602 0.0 77.2485 High  
cufflinks 38.3317 0.0 85.8576 High  
cufflinks 48.7764 0.0 110.169 High High
cufflinks 34.0652 0.0 75.6996 High  

0 Strain