Gene : Eucgr.F03546 E. grandis v2.0
Defline:  (1 of 1) PTHR21450:SF19 - F5M15.15 Genomic Order:  3163
Name:  ? Eucgr.F03546 Secondary Identifier:  ? PAC:32055342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03546 0.5kb upstream 0.5kb upstream 4299 true Chr06: 46525854-46530152 Eucalyptus grandis
Eucgr.F03546 0.5kb upstream 0.5kb upstream 500 false Chr06: 46529653-46530152 Eucalyptus grandis
Eucgr.F03546 0.5kb downstream 0.5kb downstream 4299 true Chr06: 46525354-46529652 Eucalyptus grandis
Eucgr.F03546 0.5kb downstream 0.5kb downstream 500 false Chr06: 46525354-46525853 Eucalyptus grandis
Eucgr.F03546 1.0kb upstream 1.0kb upstream 4799 true Chr06: 46525854-46530652 Eucalyptus grandis
Eucgr.F03546 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46529653-46530652 Eucalyptus grandis
Eucgr.F03546 1.0kb downstream 1.0kb downstream 4799 true Chr06: 46524854-46529652 Eucalyptus grandis
Eucgr.F03546 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46524854-46525853 Eucalyptus grandis
Eucgr.F03546 2.0kb upstream 2.0kb upstream 5799 true Chr06: 46525854-46531652 Eucalyptus grandis
Eucgr.F03546 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46529653-46531652 Eucalyptus grandis
Eucgr.F03546 2.0kb downstream 2.0kb downstream 5799 true Chr06: 46523854-46529652 Eucalyptus grandis
Eucgr.F03546 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46523854-46525853 Eucalyptus grandis
Eucgr.F03546 5.0kb upstream 5.0kb upstream 8799 true Chr06: 46525854-46534652 Eucalyptus grandis
Eucgr.F03546 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46529653-46534652 Eucalyptus grandis
Eucgr.F03546 5.0kb downstream 5.0kb downstream 8799 true Chr06: 46520854-46529652 Eucalyptus grandis
Eucgr.F03546 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46520854-46525853 Eucalyptus grandis
Eucgr.F03546 10.0kb upstream 10.0kb upstream 13799 true Chr06: 46525854-46539652 Eucalyptus grandis
Eucgr.F03546 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46529653-46539652 Eucalyptus grandis
Eucgr.F03546 10.0kb downstream 10.0kb downstream 13799 true Chr06: 46515854-46529652 Eucalyptus grandis
Eucgr.F03546 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46515854-46525853 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072264 5270 Rosid View MSA
123745447 5271 Pentapetalae View MSA
122790852 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.739376 0.0 2.09827   Low
cufflinks 1.87048 0.0 4.86967    
cufflinks 1.34337 0.0 3.60395    
cufflinks 3.96694 0.0 9.57759   High
cufflinks 4.4378 0.0 10.5662   High
cufflinks 1.22812 0.0 3.30067    

0 Strain