Gene : Eucgr.F03524 E. grandis v2.0
Defline:  (1 of 1) PTHR13068:SF13 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  3141
Name:  ? Eucgr.F03524 Secondary Identifier:  ? PAC:32055674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03524 0.5kb upstream 0.5kb upstream 5002 true Chr06: 46389015-46394016 Eucalyptus grandis
Eucgr.F03524 0.5kb upstream 0.5kb upstream 500 false Chr06: 46389015-46389514 Eucalyptus grandis
Eucgr.F03524 0.5kb downstream 0.5kb downstream 5002 true Chr06: 46389515-46394516 Eucalyptus grandis
Eucgr.F03524 0.5kb downstream 0.5kb downstream 500 false Chr06: 46394017-46394516 Eucalyptus grandis
Eucgr.F03524 1.0kb upstream 1.0kb upstream 5502 true Chr06: 46388515-46394016 Eucalyptus grandis
Eucgr.F03524 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46388515-46389514 Eucalyptus grandis
Eucgr.F03524 1.0kb downstream 1.0kb downstream 5502 true Chr06: 46389515-46395016 Eucalyptus grandis
Eucgr.F03524 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46394017-46395016 Eucalyptus grandis
Eucgr.F03524 2.0kb upstream 2.0kb upstream 6502 true Chr06: 46387515-46394016 Eucalyptus grandis
Eucgr.F03524 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46387515-46389514 Eucalyptus grandis
Eucgr.F03524 2.0kb downstream 2.0kb downstream 6502 true Chr06: 46389515-46396016 Eucalyptus grandis
Eucgr.F03524 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46394017-46396016 Eucalyptus grandis
Eucgr.F03524 5.0kb upstream 5.0kb upstream 9502 true Chr06: 46384515-46394016 Eucalyptus grandis
Eucgr.F03524 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46384515-46389514 Eucalyptus grandis
Eucgr.F03524 5.0kb downstream 5.0kb downstream 9502 true Chr06: 46389515-46399016 Eucalyptus grandis
Eucgr.F03524 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46394017-46399016 Eucalyptus grandis
Eucgr.F03524 10.0kb upstream 10.0kb upstream 14502 true Chr06: 46379515-46394016 Eucalyptus grandis
Eucgr.F03524 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46379515-46389514 Eucalyptus grandis
Eucgr.F03524 10.0kb downstream 10.0kb downstream 14502 true Chr06: 46389515-46404016 Eucalyptus grandis
Eucgr.F03524 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46394017-46404016 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067725 5270 Rosid View MSA
123736541 5271 Pentapetalae View MSA
122786414 5272 Eudicot View MSA
122044660 5273 Angiosperm View MSA
121345820 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10009 0.0 12.1002    
cufflinks 1.06569 0.0 3.12709    
cufflinks 3.08472 0.0 7.8423    
cufflinks 0.986745 0.0 2.95644    
cufflinks 0.378367 0.0 1.42517 Low Low
cufflinks 13.6848 0.0 31.2765   High

0 Strain