Gene : Eucgr.F03529 E. grandis v2.0
Defline:  (1 of 1) PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Genomic Order:  3146
Name:  ? Eucgr.F03529 Secondary Identifier:  ? PAC:32055432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03529 0.5kb upstream 0.5kb upstream 5855 true Chr06: 46411521-46417375 Eucalyptus grandis
Eucgr.F03529 0.5kb upstream 0.5kb upstream 500 false Chr06: 46411521-46412020 Eucalyptus grandis
Eucgr.F03529 0.5kb downstream 0.5kb downstream 5855 true Chr06: 46412021-46417875 Eucalyptus grandis
Eucgr.F03529 0.5kb downstream 0.5kb downstream 500 false Chr06: 46417376-46417875 Eucalyptus grandis
Eucgr.F03529 1.0kb upstream 1.0kb upstream 6355 true Chr06: 46411021-46417375 Eucalyptus grandis
Eucgr.F03529 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46411021-46412020 Eucalyptus grandis
Eucgr.F03529 1.0kb downstream 1.0kb downstream 6355 true Chr06: 46412021-46418375 Eucalyptus grandis
Eucgr.F03529 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46417376-46418375 Eucalyptus grandis
Eucgr.F03529 2.0kb upstream 2.0kb upstream 7355 true Chr06: 46410021-46417375 Eucalyptus grandis
Eucgr.F03529 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46410021-46412020 Eucalyptus grandis
Eucgr.F03529 2.0kb downstream 2.0kb downstream 7355 true Chr06: 46412021-46419375 Eucalyptus grandis
Eucgr.F03529 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46417376-46419375 Eucalyptus grandis
Eucgr.F03529 5.0kb upstream 5.0kb upstream 10355 true Chr06: 46407021-46417375 Eucalyptus grandis
Eucgr.F03529 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46407021-46412020 Eucalyptus grandis
Eucgr.F03529 5.0kb downstream 5.0kb downstream 10355 true Chr06: 46412021-46422375 Eucalyptus grandis
Eucgr.F03529 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46417376-46422375 Eucalyptus grandis
Eucgr.F03529 10.0kb upstream 10.0kb upstream 15355 true Chr06: 46402021-46417375 Eucalyptus grandis
Eucgr.F03529 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46402021-46412020 Eucalyptus grandis
Eucgr.F03529 10.0kb downstream 10.0kb downstream 15355 true Chr06: 46412021-46427375 Eucalyptus grandis
Eucgr.F03529 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46417376-46427375 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067606 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.91368 0.0 23.2507   Low
cufflinks 30.1648 0.0 66.759    
cufflinks 14.7852 0.0 33.5488    
cufflinks 35.8851 0.0 79.3624   High
cufflinks 23.2984 0.0 51.8063    
cufflinks 28.7567 0.0 63.811    

0 Strain