Gene : Eucgr.F03483 E. grandis v2.0
Defline:  (1 of 1) PTHR13673 - ESOPHAGEAL CANCER ASSOCIATED PROTEIN Genomic Order:  3100
Name:  ? Eucgr.F03483 Secondary Identifier:  ? PAC:32054897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03483 0.5kb upstream 0.5kb upstream 11892 true Chr06: 46112467-46124358 Eucalyptus grandis
Eucgr.F03483 0.5kb upstream 0.5kb upstream 500 false Chr06: 46123859-46124358 Eucalyptus grandis
Eucgr.F03483 0.5kb downstream 0.5kb downstream 11892 true Chr06: 46111967-46123858 Eucalyptus grandis
Eucgr.F03483 0.5kb downstream 0.5kb downstream 500 false Chr06: 46111967-46112466 Eucalyptus grandis
Eucgr.F03483 1.0kb upstream 1.0kb upstream 12392 true Chr06: 46112467-46124858 Eucalyptus grandis
Eucgr.F03483 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46123859-46124858 Eucalyptus grandis
Eucgr.F03483 1.0kb downstream 1.0kb downstream 12392 true Chr06: 46111467-46123858 Eucalyptus grandis
Eucgr.F03483 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46111467-46112466 Eucalyptus grandis
Eucgr.F03483 2.0kb upstream 2.0kb upstream 13392 true Chr06: 46112467-46125858 Eucalyptus grandis
Eucgr.F03483 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46123859-46125858 Eucalyptus grandis
Eucgr.F03483 2.0kb downstream 2.0kb downstream 13392 true Chr06: 46110467-46123858 Eucalyptus grandis
Eucgr.F03483 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46110467-46112466 Eucalyptus grandis
Eucgr.F03483 5.0kb upstream 5.0kb upstream 16392 true Chr06: 46112467-46128858 Eucalyptus grandis
Eucgr.F03483 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46123859-46128858 Eucalyptus grandis
Eucgr.F03483 5.0kb downstream 5.0kb downstream 16392 true Chr06: 46107467-46123858 Eucalyptus grandis
Eucgr.F03483 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46107467-46112466 Eucalyptus grandis
Eucgr.F03483 10.0kb upstream 10.0kb upstream 21392 true Chr06: 46112467-46133858 Eucalyptus grandis
Eucgr.F03483 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46123859-46133858 Eucalyptus grandis
Eucgr.F03483 10.0kb downstream 10.0kb downstream 21392 true Chr06: 46102467-46123858 Eucalyptus grandis
Eucgr.F03483 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46102467-46112466 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791819 5273 Angiosperm View MSA
124069469 5270 Rosid View MSA
123741968 5271 Pentapetalae View MSA
122794162 5272 Eudicot View MSA
121348229 5274 Embryophyte View MSA
123380782 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.27634 0.0 12.4125    
cufflinks 5.08074 0.0 11.8836    
cufflinks 4.45451 0.0 10.6439    
cufflinks 10.0503 0.0 23.0227   High
cufflinks 6.56259 0.0 15.0861    
cufflinks 5.11275 0.0 12.1748    

0 Strain