Gene : Eucgr.F03478 E. grandis v2.0
Defline:  (1 of 1) 2.7.1.130 - Tetraacyldisaccharide 4'-kinase / Lipid-A 4'-kinase Genomic Order:  3095
Name:  ? Eucgr.F03478 Secondary Identifier:  ? PAC:32052889
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis NAGLIPASYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03478 0.5kb upstream 0.5kb upstream 4407 true Chr06: 46089348-46093754 Eucalyptus grandis
Eucgr.F03478 0.5kb upstream 0.5kb upstream 500 false Chr06: 46089348-46089847 Eucalyptus grandis
Eucgr.F03478 0.5kb downstream 0.5kb downstream 4407 true Chr06: 46089848-46094254 Eucalyptus grandis
Eucgr.F03478 0.5kb downstream 0.5kb downstream 500 false Chr06: 46093755-46094254 Eucalyptus grandis
Eucgr.F03478 1.0kb upstream 1.0kb upstream 4907 true Chr06: 46088848-46093754 Eucalyptus grandis
Eucgr.F03478 1.0kb upstream 1.0kb upstream 1000 false Chr06: 46088848-46089847 Eucalyptus grandis
Eucgr.F03478 1.0kb downstream 1.0kb downstream 4907 true Chr06: 46089848-46094754 Eucalyptus grandis
Eucgr.F03478 1.0kb downstream 1.0kb downstream 1000 false Chr06: 46093755-46094754 Eucalyptus grandis
Eucgr.F03478 2.0kb upstream 2.0kb upstream 5907 true Chr06: 46087848-46093754 Eucalyptus grandis
Eucgr.F03478 2.0kb upstream 2.0kb upstream 2000 false Chr06: 46087848-46089847 Eucalyptus grandis
Eucgr.F03478 2.0kb downstream 2.0kb downstream 5907 true Chr06: 46089848-46095754 Eucalyptus grandis
Eucgr.F03478 2.0kb downstream 2.0kb downstream 2000 false Chr06: 46093755-46095754 Eucalyptus grandis
Eucgr.F03478 5.0kb upstream 5.0kb upstream 8907 true Chr06: 46084848-46093754 Eucalyptus grandis
Eucgr.F03478 5.0kb upstream 5.0kb upstream 5000 false Chr06: 46084848-46089847 Eucalyptus grandis
Eucgr.F03478 5.0kb downstream 5.0kb downstream 8907 true Chr06: 46089848-46098754 Eucalyptus grandis
Eucgr.F03478 5.0kb downstream 5.0kb downstream 5000 false Chr06: 46093755-46098754 Eucalyptus grandis
Eucgr.F03478 10.0kb upstream 10.0kb upstream 13907 true Chr06: 46079848-46093754 Eucalyptus grandis
Eucgr.F03478 10.0kb upstream 10.0kb upstream 10000 false Chr06: 46079848-46089847 Eucalyptus grandis
Eucgr.F03478 10.0kb downstream 10.0kb downstream 13907 true Chr06: 46089848-46103754 Eucalyptus grandis
Eucgr.F03478 10.0kb downstream 10.0kb downstream 10000 false Chr06: 46093755-46103754 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040908 5273 Angiosperm View MSA
124066187 5270 Rosid View MSA
123740901 5271 Pentapetalae View MSA
122791289 5272 Eudicot View MSA
121346697 5274 Embryophyte View MSA
123380430 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.27483 0.0 3.98052    
cufflinks 1.52151 0.0 4.29601    
cufflinks 1.96123 0.0 5.44291    
cufflinks 1.48359 0.0 4.16807    
cufflinks 2.58983 0.0 7.32768   High
cufflinks 0.688254 0.0 3.67926 Low Low

0 Strain