Gene : Eucgr.F03444 E. grandis v2.0
Defline:  (1 of 2) PTHR24073:SF515 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSD21 Genomic Order:  3063
Name:  ? Eucgr.F03444 Secondary Identifier:  ? PAC:32055664
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03444 0.5kb upstream 0.5kb upstream 3743 true Chr06: 45911822-45915564 Eucalyptus grandis
Eucgr.F03444 0.5kb upstream 0.5kb upstream 500 false Chr06: 45915065-45915564 Eucalyptus grandis
Eucgr.F03444 0.5kb downstream 0.5kb downstream 3743 true Chr06: 45911322-45915064 Eucalyptus grandis
Eucgr.F03444 0.5kb downstream 0.5kb downstream 500 false Chr06: 45911322-45911821 Eucalyptus grandis
Eucgr.F03444 1.0kb upstream 1.0kb upstream 4243 true Chr06: 45911822-45916064 Eucalyptus grandis
Eucgr.F03444 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45915065-45916064 Eucalyptus grandis
Eucgr.F03444 1.0kb downstream 1.0kb downstream 4243 true Chr06: 45910822-45915064 Eucalyptus grandis
Eucgr.F03444 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45910822-45911821 Eucalyptus grandis
Eucgr.F03444 2.0kb upstream 2.0kb upstream 5243 true Chr06: 45911822-45917064 Eucalyptus grandis
Eucgr.F03444 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45915065-45917064 Eucalyptus grandis
Eucgr.F03444 2.0kb downstream 2.0kb downstream 5243 true Chr06: 45909822-45915064 Eucalyptus grandis
Eucgr.F03444 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45909822-45911821 Eucalyptus grandis
Eucgr.F03444 5.0kb upstream 5.0kb upstream 8243 true Chr06: 45911822-45920064 Eucalyptus grandis
Eucgr.F03444 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45915065-45920064 Eucalyptus grandis
Eucgr.F03444 5.0kb downstream 5.0kb downstream 8243 true Chr06: 45906822-45915064 Eucalyptus grandis
Eucgr.F03444 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45906822-45911821 Eucalyptus grandis
Eucgr.F03444 10.0kb upstream 10.0kb upstream 13243 true Chr06: 45911822-45925064 Eucalyptus grandis
Eucgr.F03444 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45915065-45925064 Eucalyptus grandis
Eucgr.F03444 10.0kb downstream 10.0kb downstream 13243 true Chr06: 45901822-45915064 Eucalyptus grandis
Eucgr.F03444 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45901822-45911821 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029161 5273 Angiosperm View MSA
124064316 5270 Rosid View MSA
123753329 5271 Pentapetalae View MSA
122789157 5272 Eudicot View MSA
121298542 5274 Embryophyte View MSA
123336508 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.40461 0.0 14.0881    
cufflinks 41.7007 0.0 95.9173   High
cufflinks 5.5394 0.0 13.3693    
cufflinks 20.4835 0.0 54.575    
cufflinks 10.4664 0.0 24.9883    
cufflinks 4.80283 0.0 14.7101    

0 Strain