Gene : Eucgr.F03436 E. grandis v2.0
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN Genomic Order:  3056
Name:  ? Eucgr.F03436 Secondary Identifier:  ? PAC:32057746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03436 0.5kb upstream 0.5kb upstream 10030 true Chr06: 45837262-45847291 Eucalyptus grandis
Eucgr.F03436 0.5kb upstream 0.5kb upstream 500 false Chr06: 45846792-45847291 Eucalyptus grandis
Eucgr.F03436 0.5kb downstream 0.5kb downstream 10030 true Chr06: 45836762-45846791 Eucalyptus grandis
Eucgr.F03436 0.5kb downstream 0.5kb downstream 500 false Chr06: 45836762-45837261 Eucalyptus grandis
Eucgr.F03436 1.0kb upstream 1.0kb upstream 10530 true Chr06: 45837262-45847791 Eucalyptus grandis
Eucgr.F03436 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45846792-45847791 Eucalyptus grandis
Eucgr.F03436 1.0kb downstream 1.0kb downstream 10530 true Chr06: 45836262-45846791 Eucalyptus grandis
Eucgr.F03436 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45836262-45837261 Eucalyptus grandis
Eucgr.F03436 2.0kb upstream 2.0kb upstream 11530 true Chr06: 45837262-45848791 Eucalyptus grandis
Eucgr.F03436 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45846792-45848791 Eucalyptus grandis
Eucgr.F03436 2.0kb downstream 2.0kb downstream 11530 true Chr06: 45835262-45846791 Eucalyptus grandis
Eucgr.F03436 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45835262-45837261 Eucalyptus grandis
Eucgr.F03436 5.0kb upstream 5.0kb upstream 14530 true Chr06: 45837262-45851791 Eucalyptus grandis
Eucgr.F03436 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45846792-45851791 Eucalyptus grandis
Eucgr.F03436 5.0kb downstream 5.0kb downstream 14530 true Chr06: 45832262-45846791 Eucalyptus grandis
Eucgr.F03436 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45832262-45837261 Eucalyptus grandis
Eucgr.F03436 10.0kb upstream 10.0kb upstream 19530 true Chr06: 45837262-45856791 Eucalyptus grandis
Eucgr.F03436 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45846792-45856791 Eucalyptus grandis
Eucgr.F03436 10.0kb downstream 10.0kb downstream 19530 true Chr06: 45827262-45846791 Eucalyptus grandis
Eucgr.F03436 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45827262-45837261 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.71773 0.0 4.62896    
cufflinks 12.6304 0.0 28.4125   High
cufflinks 0.9336 0.0 2.6708   Low
cufflinks 21.7623 0.0 48.1629   High
cufflinks 2.53531 0.0 6.55264    
cufflinks 2.17359 0.0 5.73899    

0 Strain