Gene : Eucgr.F03460 E. grandis v2.0
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  3077
Name:  ? Eucgr.F03460 Secondary Identifier:  ? PAC:32055163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03460 0.5kb upstream 0.5kb upstream 4680 true Chr06: 45971630-45976309 Eucalyptus grandis
Eucgr.F03460 0.5kb upstream 0.5kb upstream 500 false Chr06: 45975810-45976309 Eucalyptus grandis
Eucgr.F03460 0.5kb downstream 0.5kb downstream 4680 true Chr06: 45971130-45975809 Eucalyptus grandis
Eucgr.F03460 0.5kb downstream 0.5kb downstream 500 false Chr06: 45971130-45971629 Eucalyptus grandis
Eucgr.F03460 1.0kb upstream 1.0kb upstream 5180 true Chr06: 45971630-45976809 Eucalyptus grandis
Eucgr.F03460 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45975810-45976809 Eucalyptus grandis
Eucgr.F03460 1.0kb downstream 1.0kb downstream 5180 true Chr06: 45970630-45975809 Eucalyptus grandis
Eucgr.F03460 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45970630-45971629 Eucalyptus grandis
Eucgr.F03460 2.0kb upstream 2.0kb upstream 6180 true Chr06: 45971630-45977809 Eucalyptus grandis
Eucgr.F03460 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45975810-45977809 Eucalyptus grandis
Eucgr.F03460 2.0kb downstream 2.0kb downstream 6180 true Chr06: 45969630-45975809 Eucalyptus grandis
Eucgr.F03460 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45969630-45971629 Eucalyptus grandis
Eucgr.F03460 5.0kb upstream 5.0kb upstream 9180 true Chr06: 45971630-45980809 Eucalyptus grandis
Eucgr.F03460 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45975810-45980809 Eucalyptus grandis
Eucgr.F03460 5.0kb downstream 5.0kb downstream 9180 true Chr06: 45966630-45975809 Eucalyptus grandis
Eucgr.F03460 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45966630-45971629 Eucalyptus grandis
Eucgr.F03460 10.0kb upstream 10.0kb upstream 14180 true Chr06: 45971630-45985809 Eucalyptus grandis
Eucgr.F03460 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45975810-45985809 Eucalyptus grandis
Eucgr.F03460 10.0kb downstream 10.0kb downstream 14180 true Chr06: 45961630-45975809 Eucalyptus grandis
Eucgr.F03460 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45961630-45971629 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062826 5270 Rosid View MSA
123744265 5271 Pentapetalae View MSA
122793169 5272 Eudicot View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 167.73 0.0 372.929 High  
cufflinks 53.1987 0.0 119.672 High Low
cufflinks 105.585 0.0 233.6 High  
cufflinks 121.835 0.0 269.436 High  
cufflinks 174.143 0.0 387.656 High  
cufflinks 150.309 0.0 333.291 High  

0 Strain