Gene : Eucgr.F03430 E. grandis v2.0
Defline:  (1 of 3) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  3050
Name:  ? Eucgr.F03430 Secondary Identifier:  ? PAC:32052722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03430 0.5kb upstream 0.5kb upstream 5572 true Chr06: 45802458-45808029 Eucalyptus grandis
Eucgr.F03430 0.5kb upstream 0.5kb upstream 500 false Chr06: 45807530-45808029 Eucalyptus grandis
Eucgr.F03430 0.5kb downstream 0.5kb downstream 5572 true Chr06: 45801958-45807529 Eucalyptus grandis
Eucgr.F03430 0.5kb downstream 0.5kb downstream 500 false Chr06: 45801958-45802457 Eucalyptus grandis
Eucgr.F03430 1.0kb upstream 1.0kb upstream 6072 true Chr06: 45802458-45808529 Eucalyptus grandis
Eucgr.F03430 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45807530-45808529 Eucalyptus grandis
Eucgr.F03430 1.0kb downstream 1.0kb downstream 6072 true Chr06: 45801458-45807529 Eucalyptus grandis
Eucgr.F03430 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45801458-45802457 Eucalyptus grandis
Eucgr.F03430 2.0kb upstream 2.0kb upstream 7072 true Chr06: 45802458-45809529 Eucalyptus grandis
Eucgr.F03430 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45807530-45809529 Eucalyptus grandis
Eucgr.F03430 2.0kb downstream 2.0kb downstream 7072 true Chr06: 45800458-45807529 Eucalyptus grandis
Eucgr.F03430 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45800458-45802457 Eucalyptus grandis
Eucgr.F03430 5.0kb upstream 5.0kb upstream 10072 true Chr06: 45802458-45812529 Eucalyptus grandis
Eucgr.F03430 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45807530-45812529 Eucalyptus grandis
Eucgr.F03430 5.0kb downstream 5.0kb downstream 10072 true Chr06: 45797458-45807529 Eucalyptus grandis
Eucgr.F03430 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45797458-45802457 Eucalyptus grandis
Eucgr.F03430 10.0kb upstream 10.0kb upstream 15072 true Chr06: 45802458-45817529 Eucalyptus grandis
Eucgr.F03430 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45807530-45817529 Eucalyptus grandis
Eucgr.F03430 10.0kb downstream 10.0kb downstream 15072 true Chr06: 45792458-45807529 Eucalyptus grandis
Eucgr.F03430 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45792458-45802457 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061574 5270 Rosid View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.0573 0.0 125.65 High  
cufflinks 75.8509 0.0 180.452 High  
cufflinks 44.8647 0.0 106.616 High Low
cufflinks 108.113 0.0 290.438 High High
cufflinks 93.7931 0.0 216.265 High  
cufflinks 63.7369 0.0 167.454 High  

0 Strain