Gene : Eucgr.F04107 E. grandis v2.0
Defline:  (1 of 1) PTHR11262:SF4 - ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL Genomic Order:  3657
Name:  ? Eucgr.F04107 Secondary Identifier:  ? PAC:32053876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04107 0.5kb upstream 0.5kb upstream 9114 true Chr06: 51814729-51823842 Eucalyptus grandis
Eucgr.F04107 0.5kb upstream 0.5kb upstream 500 false Chr06: 51823343-51823842 Eucalyptus grandis
Eucgr.F04107 0.5kb downstream 0.5kb downstream 9114 true Chr06: 51814229-51823342 Eucalyptus grandis
Eucgr.F04107 0.5kb downstream 0.5kb downstream 500 false Chr06: 51814229-51814728 Eucalyptus grandis
Eucgr.F04107 1.0kb upstream 1.0kb upstream 9614 true Chr06: 51814729-51824342 Eucalyptus grandis
Eucgr.F04107 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51823343-51824342 Eucalyptus grandis
Eucgr.F04107 1.0kb downstream 1.0kb downstream 9614 true Chr06: 51813729-51823342 Eucalyptus grandis
Eucgr.F04107 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51813729-51814728 Eucalyptus grandis
Eucgr.F04107 2.0kb upstream 2.0kb upstream 10614 true Chr06: 51814729-51825342 Eucalyptus grandis
Eucgr.F04107 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51823343-51825342 Eucalyptus grandis
Eucgr.F04107 2.0kb downstream 2.0kb downstream 10614 true Chr06: 51812729-51823342 Eucalyptus grandis
Eucgr.F04107 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51812729-51814728 Eucalyptus grandis
Eucgr.F04107 5.0kb upstream 5.0kb upstream 13614 true Chr06: 51814729-51828342 Eucalyptus grandis
Eucgr.F04107 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51823343-51828342 Eucalyptus grandis
Eucgr.F04107 5.0kb downstream 5.0kb downstream 13614 true Chr06: 51809729-51823342 Eucalyptus grandis
Eucgr.F04107 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51809729-51814728 Eucalyptus grandis
Eucgr.F04107 10.0kb upstream 10.0kb upstream 18614 true Chr06: 51814729-51833342 Eucalyptus grandis
Eucgr.F04107 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51823343-51833342 Eucalyptus grandis
Eucgr.F04107 10.0kb downstream 10.0kb downstream 18614 true Chr06: 51804729-51823342 Eucalyptus grandis
Eucgr.F04107 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51804729-51814728 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069247 5270 Rosid View MSA
123739366 5271 Pentapetalae View MSA
122793797 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2594 0.0 34.4516    
cufflinks 12.6801 0.0 28.4448    
cufflinks 13.9236 0.0 31.4153    
cufflinks 11.103 0.0 25.2077    
cufflinks 8.06307 0.0 18.6668   Low
cufflinks 35.3586 0.0 83.0343 High High

0 Strain