Gene : Eucgr.F04120 E. grandis v2.0
Defline:  (1 of 1) PTHR11599:SF16 - PROTEASOME SUBUNIT ALPHA TYPE-2 Genomic Order:  3669
Name:  ? Eucgr.F04120 Secondary Identifier:  ? PAC:32056795
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04120 0.5kb upstream 0.5kb upstream 10051 true Chr06: 51908831-51918881 Eucalyptus grandis
Eucgr.F04120 0.5kb upstream 0.5kb upstream 500 false Chr06: 51908831-51909330 Eucalyptus grandis
Eucgr.F04120 0.5kb downstream 0.5kb downstream 10051 true Chr06: 51909331-51919381 Eucalyptus grandis
Eucgr.F04120 0.5kb downstream 0.5kb downstream 500 false Chr06: 51918882-51919381 Eucalyptus grandis
Eucgr.F04120 1.0kb upstream 1.0kb upstream 10551 true Chr06: 51908331-51918881 Eucalyptus grandis
Eucgr.F04120 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51908331-51909330 Eucalyptus grandis
Eucgr.F04120 1.0kb downstream 1.0kb downstream 10551 true Chr06: 51909331-51919881 Eucalyptus grandis
Eucgr.F04120 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51918882-51919881 Eucalyptus grandis
Eucgr.F04120 2.0kb upstream 2.0kb upstream 11551 true Chr06: 51907331-51918881 Eucalyptus grandis
Eucgr.F04120 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51907331-51909330 Eucalyptus grandis
Eucgr.F04120 2.0kb downstream 2.0kb downstream 11551 true Chr06: 51909331-51920881 Eucalyptus grandis
Eucgr.F04120 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51918882-51920881 Eucalyptus grandis
Eucgr.F04120 5.0kb upstream 5.0kb upstream 14551 true Chr06: 51904331-51918881 Eucalyptus grandis
Eucgr.F04120 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51904331-51909330 Eucalyptus grandis
Eucgr.F04120 5.0kb downstream 5.0kb downstream 14551 true Chr06: 51909331-51923881 Eucalyptus grandis
Eucgr.F04120 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51918882-51923881 Eucalyptus grandis
Eucgr.F04120 10.0kb upstream 10.0kb upstream 19551 true Chr06: 51899331-51918881 Eucalyptus grandis
Eucgr.F04120 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51899331-51909330 Eucalyptus grandis
Eucgr.F04120 10.0kb downstream 10.0kb downstream 19551 true Chr06: 51909331-51928881 Eucalyptus grandis
Eucgr.F04120 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51918882-51928881 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026291 5273 Angiosperm View MSA
124069190 5270 Rosid View MSA
123746972 5271 Pentapetalae View MSA
122795211 5272 Eudicot View MSA
121350421 5274 Embryophyte View MSA
123426464 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.7431 0.0 150.991 High  
cufflinks 76.0776 0.0 176.437 High  
cufflinks 58.9641 0.0 134.417 High  
cufflinks 108.385 0.0 260.114 High High
cufflinks 81.4599 0.0 189.25 High  
cufflinks 47.2874 0.0 106.138 High Low

0 Strain