Gene : Eucgr.F04115 E. grandis v2.0
Defline:  (1 of 1) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3664
Name:  ? Eucgr.F04115 Secondary Identifier:  ? PAC:32055504
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04115 0.5kb upstream 0.5kb upstream 2163 true Chr06: 51884753-51886915 Eucalyptus grandis
Eucgr.F04115 0.5kb upstream 0.5kb upstream 500 false Chr06: 51886416-51886915 Eucalyptus grandis
Eucgr.F04115 0.5kb downstream 0.5kb downstream 2163 true Chr06: 51884253-51886415 Eucalyptus grandis
Eucgr.F04115 0.5kb downstream 0.5kb downstream 500 false Chr06: 51884253-51884752 Eucalyptus grandis
Eucgr.F04115 1.0kb upstream 1.0kb upstream 2663 true Chr06: 51884753-51887415 Eucalyptus grandis
Eucgr.F04115 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51886416-51887415 Eucalyptus grandis
Eucgr.F04115 1.0kb downstream 1.0kb downstream 2663 true Chr06: 51883753-51886415 Eucalyptus grandis
Eucgr.F04115 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51883753-51884752 Eucalyptus grandis
Eucgr.F04115 2.0kb upstream 2.0kb upstream 3663 true Chr06: 51884753-51888415 Eucalyptus grandis
Eucgr.F04115 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51886416-51888415 Eucalyptus grandis
Eucgr.F04115 2.0kb downstream 2.0kb downstream 3663 true Chr06: 51882753-51886415 Eucalyptus grandis
Eucgr.F04115 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51882753-51884752 Eucalyptus grandis
Eucgr.F04115 5.0kb upstream 5.0kb upstream 6663 true Chr06: 51884753-51891415 Eucalyptus grandis
Eucgr.F04115 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51886416-51891415 Eucalyptus grandis
Eucgr.F04115 5.0kb downstream 5.0kb downstream 6663 true Chr06: 51879753-51886415 Eucalyptus grandis
Eucgr.F04115 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51879753-51884752 Eucalyptus grandis
Eucgr.F04115 10.0kb upstream 10.0kb upstream 11663 true Chr06: 51884753-51896415 Eucalyptus grandis
Eucgr.F04115 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51886416-51896415 Eucalyptus grandis
Eucgr.F04115 10.0kb downstream 10.0kb downstream 11663 true Chr06: 51874753-51886415 Eucalyptus grandis
Eucgr.F04115 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51874753-51884752 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243414 0.0 0.829304 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0660721 0.0 0.299197 Low Low
cufflinks 0.130006 0.0 0.489829 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.678139 0.0 2.00497 Low High

0 Strain