Gene : Eucgr.F04070 E. grandis v2.0
Defline:  (1 of 1) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  3622
Name:  ? Eucgr.F04070 Secondary Identifier:  ? PAC:32055057
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis SER-GLYSYN-PWY Eucalyptus grandis pathologic  
Egrandis SERSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04070 0.5kb upstream 0.5kb upstream 7481 true Chr06: 51408300-51415780 Eucalyptus grandis
Eucgr.F04070 0.5kb upstream 0.5kb upstream 500 false Chr06: 51415281-51415780 Eucalyptus grandis
Eucgr.F04070 0.5kb downstream 0.5kb downstream 7481 true Chr06: 51407800-51415280 Eucalyptus grandis
Eucgr.F04070 0.5kb downstream 0.5kb downstream 500 false Chr06: 51407800-51408299 Eucalyptus grandis
Eucgr.F04070 1.0kb upstream 1.0kb upstream 7981 true Chr06: 51408300-51416280 Eucalyptus grandis
Eucgr.F04070 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51415281-51416280 Eucalyptus grandis
Eucgr.F04070 1.0kb downstream 1.0kb downstream 7981 true Chr06: 51407300-51415280 Eucalyptus grandis
Eucgr.F04070 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51407300-51408299 Eucalyptus grandis
Eucgr.F04070 2.0kb upstream 2.0kb upstream 8981 true Chr06: 51408300-51417280 Eucalyptus grandis
Eucgr.F04070 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51415281-51417280 Eucalyptus grandis
Eucgr.F04070 2.0kb downstream 2.0kb downstream 8981 true Chr06: 51406300-51415280 Eucalyptus grandis
Eucgr.F04070 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51406300-51408299 Eucalyptus grandis
Eucgr.F04070 5.0kb upstream 5.0kb upstream 11981 true Chr06: 51408300-51420280 Eucalyptus grandis
Eucgr.F04070 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51415281-51420280 Eucalyptus grandis
Eucgr.F04070 5.0kb downstream 5.0kb downstream 11981 true Chr06: 51403300-51415280 Eucalyptus grandis
Eucgr.F04070 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51403300-51408299 Eucalyptus grandis
Eucgr.F04070 10.0kb upstream 10.0kb upstream 16981 true Chr06: 51408300-51425280 Eucalyptus grandis
Eucgr.F04070 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51415281-51425280 Eucalyptus grandis
Eucgr.F04070 10.0kb downstream 10.0kb downstream 16981 true Chr06: 51398300-51415280 Eucalyptus grandis
Eucgr.F04070 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51398300-51408299 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063088 5270 Rosid View MSA
123747580 5271 Pentapetalae View MSA
122795035 5272 Eudicot View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2485 0.0 30.4871    
cufflinks 43.9283 0.0 113.654 High High
cufflinks 15.9193 0.0 52.6477    
cufflinks 30.5493 0.0 96.6542    
cufflinks 21.2028 0.0 64.7184    
cufflinks 7.11656 0.0 21.0451   Low

0 Strain