Gene : Eucgr.F04055 E. grandis v2.0
Defline:  (1 of 1) PTHR31314:SF8 - MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN Genomic Order:  3607
Name:  ? Eucgr.F04055 Secondary Identifier:  ? PAC:32053947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04055 0.5kb upstream 0.5kb upstream 6886 true Chr06: 51329399-51336284 Eucalyptus grandis
Eucgr.F04055 0.5kb upstream 0.5kb upstream 500 false Chr06: 51329399-51329898 Eucalyptus grandis
Eucgr.F04055 0.5kb downstream 0.5kb downstream 6886 true Chr06: 51329899-51336784 Eucalyptus grandis
Eucgr.F04055 0.5kb downstream 0.5kb downstream 500 false Chr06: 51336285-51336784 Eucalyptus grandis
Eucgr.F04055 1.0kb upstream 1.0kb upstream 7386 true Chr06: 51328899-51336284 Eucalyptus grandis
Eucgr.F04055 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51328899-51329898 Eucalyptus grandis
Eucgr.F04055 1.0kb downstream 1.0kb downstream 7386 true Chr06: 51329899-51337284 Eucalyptus grandis
Eucgr.F04055 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51336285-51337284 Eucalyptus grandis
Eucgr.F04055 2.0kb upstream 2.0kb upstream 8386 true Chr06: 51327899-51336284 Eucalyptus grandis
Eucgr.F04055 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51327899-51329898 Eucalyptus grandis
Eucgr.F04055 2.0kb downstream 2.0kb downstream 8386 true Chr06: 51329899-51338284 Eucalyptus grandis
Eucgr.F04055 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51336285-51338284 Eucalyptus grandis
Eucgr.F04055 5.0kb upstream 5.0kb upstream 11386 true Chr06: 51324899-51336284 Eucalyptus grandis
Eucgr.F04055 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51324899-51329898 Eucalyptus grandis
Eucgr.F04055 5.0kb downstream 5.0kb downstream 11386 true Chr06: 51329899-51341284 Eucalyptus grandis
Eucgr.F04055 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51336285-51341284 Eucalyptus grandis
Eucgr.F04055 10.0kb upstream 10.0kb upstream 16386 true Chr06: 51319899-51336284 Eucalyptus grandis
Eucgr.F04055 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51319899-51329898 Eucalyptus grandis
Eucgr.F04055 10.0kb downstream 10.0kb downstream 16386 true Chr06: 51329899-51346284 Eucalyptus grandis
Eucgr.F04055 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51336285-51346284 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068367 5270 Rosid View MSA
123741625 5271 Pentapetalae View MSA
122798049 5272 Eudicot View MSA
122046922 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.38167 0.0 16.998    
cufflinks 14.2159 0.0 32.0374   High
cufflinks 6.1816 0.0 14.4108    
cufflinks 3.41344 0.0 8.599    
cufflinks 1.91242 0.0 5.37737   Low
cufflinks 8.7086 0.0 20.8571    

0 Strain