Gene : Eucgr.F04058 E. grandis v2.0
Defline:  (1 of 1) PTHR32166:SF20 - HAT TRANSPOSON SUPERFAMILY PROTEIN Genomic Order:  3610
Name:  ? Eucgr.F04058 Secondary Identifier:  ? PAC:32057289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04058 0.5kb upstream 0.5kb upstream 2531 true Chr06: 51343849-51346379 Eucalyptus grandis
Eucgr.F04058 0.5kb upstream 0.5kb upstream 500 false Chr06: 51343849-51344348 Eucalyptus grandis
Eucgr.F04058 0.5kb downstream 0.5kb downstream 2531 true Chr06: 51344349-51346879 Eucalyptus grandis
Eucgr.F04058 0.5kb downstream 0.5kb downstream 500 false Chr06: 51346380-51346879 Eucalyptus grandis
Eucgr.F04058 1.0kb upstream 1.0kb upstream 3031 true Chr06: 51343349-51346379 Eucalyptus grandis
Eucgr.F04058 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51343349-51344348 Eucalyptus grandis
Eucgr.F04058 1.0kb downstream 1.0kb downstream 3031 true Chr06: 51344349-51347379 Eucalyptus grandis
Eucgr.F04058 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51346380-51347379 Eucalyptus grandis
Eucgr.F04058 2.0kb upstream 2.0kb upstream 4031 true Chr06: 51342349-51346379 Eucalyptus grandis
Eucgr.F04058 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51342349-51344348 Eucalyptus grandis
Eucgr.F04058 2.0kb downstream 2.0kb downstream 4031 true Chr06: 51344349-51348379 Eucalyptus grandis
Eucgr.F04058 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51346380-51348379 Eucalyptus grandis
Eucgr.F04058 5.0kb upstream 5.0kb upstream 7031 true Chr06: 51339349-51346379 Eucalyptus grandis
Eucgr.F04058 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51339349-51344348 Eucalyptus grandis
Eucgr.F04058 5.0kb downstream 5.0kb downstream 7031 true Chr06: 51344349-51351379 Eucalyptus grandis
Eucgr.F04058 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51346380-51351379 Eucalyptus grandis
Eucgr.F04058 10.0kb upstream 10.0kb upstream 12031 true Chr06: 51334349-51346379 Eucalyptus grandis
Eucgr.F04058 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51334349-51344348 Eucalyptus grandis
Eucgr.F04058 10.0kb downstream 10.0kb downstream 12031 true Chr06: 51344349-51356379 Eucalyptus grandis
Eucgr.F04058 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51346380-51356379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050464 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.2037 0.0 0.693998 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0961015 0.0 0.36024 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain