Gene : Eucgr.F04061 E. grandis v2.0
Defline:  (1 of 2) 1.3.1.75 - Divinyl chlorophyllide a 8-vinyl-reductase / [4-vinyl]chlorophyllide a reductase Genomic Order:  3613
Name:  ? Eucgr.F04061 Secondary Identifier:  ? PAC:32054735
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5064 Eucalyptus grandis pathologic  
Egrandis PWY-5086 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04061 0.5kb upstream 0.5kb upstream 4992 true Chr06: 51364048-51369039 Eucalyptus grandis
Eucgr.F04061 0.5kb upstream 0.5kb upstream 500 false Chr06: 51368540-51369039 Eucalyptus grandis
Eucgr.F04061 0.5kb downstream 0.5kb downstream 4992 true Chr06: 51363548-51368539 Eucalyptus grandis
Eucgr.F04061 0.5kb downstream 0.5kb downstream 500 false Chr06: 51363548-51364047 Eucalyptus grandis
Eucgr.F04061 1.0kb upstream 1.0kb upstream 5492 true Chr06: 51364048-51369539 Eucalyptus grandis
Eucgr.F04061 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51368540-51369539 Eucalyptus grandis
Eucgr.F04061 1.0kb downstream 1.0kb downstream 5492 true Chr06: 51363048-51368539 Eucalyptus grandis
Eucgr.F04061 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51363048-51364047 Eucalyptus grandis
Eucgr.F04061 2.0kb upstream 2.0kb upstream 6492 true Chr06: 51364048-51370539 Eucalyptus grandis
Eucgr.F04061 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51368540-51370539 Eucalyptus grandis
Eucgr.F04061 2.0kb downstream 2.0kb downstream 6492 true Chr06: 51362048-51368539 Eucalyptus grandis
Eucgr.F04061 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51362048-51364047 Eucalyptus grandis
Eucgr.F04061 5.0kb upstream 5.0kb upstream 9492 true Chr06: 51364048-51373539 Eucalyptus grandis
Eucgr.F04061 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51368540-51373539 Eucalyptus grandis
Eucgr.F04061 5.0kb downstream 5.0kb downstream 9492 true Chr06: 51359048-51368539 Eucalyptus grandis
Eucgr.F04061 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51359048-51364047 Eucalyptus grandis
Eucgr.F04061 10.0kb upstream 10.0kb upstream 14492 true Chr06: 51364048-51378539 Eucalyptus grandis
Eucgr.F04061 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51368540-51378539 Eucalyptus grandis
Eucgr.F04061 10.0kb downstream 10.0kb downstream 14492 true Chr06: 51354048-51368539 Eucalyptus grandis
Eucgr.F04061 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51354048-51364047 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.63105 0.0 17.569    
cufflinks 2.35715 0.0 6.0564    
cufflinks 6.21389 0.0 14.5673    
cufflinks 0.65195 0.0 1.91283   Low
cufflinks 1.04233 0.0 2.9116    
cufflinks 17.789 0.0 39.4123   High

0 Strain