Gene : Eucgr.F04028 E. grandis v2.0
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  3584
Name:  ? Eucgr.F04028 Secondary Identifier:  ? PAC:32057810
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2541 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04028 0.5kb upstream 0.5kb upstream 7527 true Chr06: 50906771-50914297 Eucalyptus grandis
Eucgr.F04028 0.5kb upstream 0.5kb upstream 500 false Chr06: 50906771-50907270 Eucalyptus grandis
Eucgr.F04028 0.5kb downstream 0.5kb downstream 7527 true Chr06: 50907271-50914797 Eucalyptus grandis
Eucgr.F04028 0.5kb downstream 0.5kb downstream 500 false Chr06: 50914298-50914797 Eucalyptus grandis
Eucgr.F04028 1.0kb upstream 1.0kb upstream 8027 true Chr06: 50906271-50914297 Eucalyptus grandis
Eucgr.F04028 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50906271-50907270 Eucalyptus grandis
Eucgr.F04028 1.0kb downstream 1.0kb downstream 8027 true Chr06: 50907271-50915297 Eucalyptus grandis
Eucgr.F04028 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50914298-50915297 Eucalyptus grandis
Eucgr.F04028 2.0kb upstream 2.0kb upstream 9027 true Chr06: 50905271-50914297 Eucalyptus grandis
Eucgr.F04028 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50905271-50907270 Eucalyptus grandis
Eucgr.F04028 2.0kb downstream 2.0kb downstream 9027 true Chr06: 50907271-50916297 Eucalyptus grandis
Eucgr.F04028 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50914298-50916297 Eucalyptus grandis
Eucgr.F04028 5.0kb upstream 5.0kb upstream 12027 true Chr06: 50902271-50914297 Eucalyptus grandis
Eucgr.F04028 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50902271-50907270 Eucalyptus grandis
Eucgr.F04028 5.0kb downstream 5.0kb downstream 12027 true Chr06: 50907271-50919297 Eucalyptus grandis
Eucgr.F04028 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50914298-50919297 Eucalyptus grandis
Eucgr.F04028 10.0kb upstream 10.0kb upstream 17027 true Chr06: 50897271-50914297 Eucalyptus grandis
Eucgr.F04028 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50897271-50907270 Eucalyptus grandis
Eucgr.F04028 10.0kb downstream 10.0kb downstream 17027 true Chr06: 50907271-50924297 Eucalyptus grandis
Eucgr.F04028 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50914298-50924297 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.1083 0.0 77.7791 High Low
cufflinks 59.561 0.0 134.521 High  
cufflinks 41.7815 0.0 92.9372 High  
cufflinks 65.9653 0.0 149.939 High  
cufflinks 50.0695 0.0 112.06 High  
cufflinks 101.573 0.0 236.828 High High

0 Strain