Gene : Eucgr.F03997 E. grandis v2.0
Defline:  (1 of 2) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  3554
Name:  ? Eucgr.F03997 Secondary Identifier:  ? PAC:32057294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03997 0.5kb upstream 0.5kb upstream 5141 true Chr06: 50685776-50690916 Eucalyptus grandis
Eucgr.F03997 0.5kb upstream 0.5kb upstream 500 false Chr06: 50690417-50690916 Eucalyptus grandis
Eucgr.F03997 0.5kb downstream 0.5kb downstream 5141 true Chr06: 50685276-50690416 Eucalyptus grandis
Eucgr.F03997 0.5kb downstream 0.5kb downstream 500 false Chr06: 50685276-50685775 Eucalyptus grandis
Eucgr.F03997 1.0kb upstream 1.0kb upstream 5641 true Chr06: 50685776-50691416 Eucalyptus grandis
Eucgr.F03997 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50690417-50691416 Eucalyptus grandis
Eucgr.F03997 1.0kb downstream 1.0kb downstream 5641 true Chr06: 50684776-50690416 Eucalyptus grandis
Eucgr.F03997 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50684776-50685775 Eucalyptus grandis
Eucgr.F03997 2.0kb upstream 2.0kb upstream 6641 true Chr06: 50685776-50692416 Eucalyptus grandis
Eucgr.F03997 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50690417-50692416 Eucalyptus grandis
Eucgr.F03997 2.0kb downstream 2.0kb downstream 6641 true Chr06: 50683776-50690416 Eucalyptus grandis
Eucgr.F03997 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50683776-50685775 Eucalyptus grandis
Eucgr.F03997 5.0kb upstream 5.0kb upstream 9641 true Chr06: 50685776-50695416 Eucalyptus grandis
Eucgr.F03997 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50690417-50695416 Eucalyptus grandis
Eucgr.F03997 5.0kb downstream 5.0kb downstream 9641 true Chr06: 50680776-50690416 Eucalyptus grandis
Eucgr.F03997 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50680776-50685775 Eucalyptus grandis
Eucgr.F03997 10.0kb upstream 10.0kb upstream 14641 true Chr06: 50685776-50700416 Eucalyptus grandis
Eucgr.F03997 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50690417-50700416 Eucalyptus grandis
Eucgr.F03997 10.0kb downstream 10.0kb downstream 14641 true Chr06: 50675776-50690416 Eucalyptus grandis
Eucgr.F03997 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50675776-50685775 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.61889 0.0 18.7908    
cufflinks 2.82859 0.0 7.82447   Low
cufflinks 7.64234 0.0 22.7674    
cufflinks 5.19151 0.0 14.7592    
cufflinks 6.49747 0.0 15.6066    
cufflinks 6.96516 0.0 16.8387    

0 Strain