Gene : Eucgr.F03998 E. grandis v2.0
Defline:  (1 of 1) PTHR11702:SF4 - NUCLEOLAR GTP-BINDING PROTEIN 1 Genomic Order:  3556
Name:  ? Eucgr.F03998 Secondary Identifier:  ? PAC:32056062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03998 0.5kb upstream 0.5kb upstream 4343 true Chr06: 50692498-50696840 Eucalyptus grandis
Eucgr.F03998 0.5kb upstream 0.5kb upstream 500 false Chr06: 50696341-50696840 Eucalyptus grandis
Eucgr.F03998 0.5kb downstream 0.5kb downstream 4343 true Chr06: 50691998-50696340 Eucalyptus grandis
Eucgr.F03998 0.5kb downstream 0.5kb downstream 500 false Chr06: 50691998-50692497 Eucalyptus grandis
Eucgr.F03998 1.0kb upstream 1.0kb upstream 4843 true Chr06: 50692498-50697340 Eucalyptus grandis
Eucgr.F03998 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50696341-50697340 Eucalyptus grandis
Eucgr.F03998 1.0kb downstream 1.0kb downstream 4843 true Chr06: 50691498-50696340 Eucalyptus grandis
Eucgr.F03998 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50691498-50692497 Eucalyptus grandis
Eucgr.F03998 2.0kb upstream 2.0kb upstream 5843 true Chr06: 50692498-50698340 Eucalyptus grandis
Eucgr.F03998 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50696341-50698340 Eucalyptus grandis
Eucgr.F03998 2.0kb downstream 2.0kb downstream 5843 true Chr06: 50690498-50696340 Eucalyptus grandis
Eucgr.F03998 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50690498-50692497 Eucalyptus grandis
Eucgr.F03998 5.0kb upstream 5.0kb upstream 8843 true Chr06: 50692498-50701340 Eucalyptus grandis
Eucgr.F03998 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50696341-50701340 Eucalyptus grandis
Eucgr.F03998 5.0kb downstream 5.0kb downstream 8843 true Chr06: 50687498-50696340 Eucalyptus grandis
Eucgr.F03998 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50687498-50692497 Eucalyptus grandis
Eucgr.F03998 10.0kb upstream 10.0kb upstream 13843 true Chr06: 50692498-50706340 Eucalyptus grandis
Eucgr.F03998 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50696341-50706340 Eucalyptus grandis
Eucgr.F03998 10.0kb downstream 10.0kb downstream 13843 true Chr06: 50682498-50696340 Eucalyptus grandis
Eucgr.F03998 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50682498-50692497 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066492 5270 Rosid View MSA
123743688 5271 Pentapetalae View MSA
122793549 5272 Eudicot View MSA
122045778 5273 Angiosperm View MSA
121346739 5274 Embryophyte View MSA
123428568 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7036 0.0 30.737    
cufflinks 3.94254 0.0 9.26064   Low
cufflinks 10.1077 0.0 22.7755    
cufflinks 9.05982 0.0 20.5267    
cufflinks 6.06817 0.0 14.4784    
cufflinks 18.4653 0.0 42.0222   High

0 Strain