Gene : Eucgr.F03976 E. grandis v2.0
Defline:  (1 of 5) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Genomic Order:  3534
Name:  ? Eucgr.F03976 Secondary Identifier:  ? PAC:32054429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03976 0.5kb upstream 0.5kb upstream 12218 true Chr06: 50535975-50548192 Eucalyptus grandis
Eucgr.F03976 0.5kb upstream 0.5kb upstream 500 false Chr06: 50547693-50548192 Eucalyptus grandis
Eucgr.F03976 0.5kb downstream 0.5kb downstream 12218 true Chr06: 50535475-50547692 Eucalyptus grandis
Eucgr.F03976 0.5kb downstream 0.5kb downstream 500 false Chr06: 50535475-50535974 Eucalyptus grandis
Eucgr.F03976 1.0kb upstream 1.0kb upstream 12718 true Chr06: 50535975-50548692 Eucalyptus grandis
Eucgr.F03976 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50547693-50548692 Eucalyptus grandis
Eucgr.F03976 1.0kb downstream 1.0kb downstream 12718 true Chr06: 50534975-50547692 Eucalyptus grandis
Eucgr.F03976 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50534975-50535974 Eucalyptus grandis
Eucgr.F03976 2.0kb upstream 2.0kb upstream 13718 true Chr06: 50535975-50549692 Eucalyptus grandis
Eucgr.F03976 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50547693-50549692 Eucalyptus grandis
Eucgr.F03976 2.0kb downstream 2.0kb downstream 13718 true Chr06: 50533975-50547692 Eucalyptus grandis
Eucgr.F03976 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50533975-50535974 Eucalyptus grandis
Eucgr.F03976 5.0kb upstream 5.0kb upstream 16718 true Chr06: 50535975-50552692 Eucalyptus grandis
Eucgr.F03976 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50547693-50552692 Eucalyptus grandis
Eucgr.F03976 5.0kb downstream 5.0kb downstream 16718 true Chr06: 50530975-50547692 Eucalyptus grandis
Eucgr.F03976 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50530975-50535974 Eucalyptus grandis
Eucgr.F03976 10.0kb upstream 10.0kb upstream 21718 true Chr06: 50535975-50557692 Eucalyptus grandis
Eucgr.F03976 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50547693-50557692 Eucalyptus grandis
Eucgr.F03976 10.0kb downstream 10.0kb downstream 21718 true Chr06: 50525975-50547692 Eucalyptus grandis
Eucgr.F03976 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50525975-50535974 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064235 5270 Rosid View MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.03342 0.0 18.6506   Low
cufflinks 12.8109 0.0 28.8401    
cufflinks 8.99659 0.0 22.7481    
cufflinks 13.3546 0.0 31.7931   High
cufflinks 12.3339 0.0 27.8463    
cufflinks 9.22895 0.0 21.1891    

0 Strain