Gene : Eucgr.F03961 E. grandis v2.0
Defline:  (1 of 1) PTHR24223:SF232 - SERINE PROTEASE/ABC TRANSPORTER B FAMILY PROTEIN TAGB-RELATED Genomic Order:  3520
Name:  ? Eucgr.F03961 Secondary Identifier:  ? PAC:32055250
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03961 0.5kb upstream 0.5kb upstream 18093 true Chr06: 50394050-50412142 Eucalyptus grandis
Eucgr.F03961 0.5kb upstream 0.5kb upstream 500 false Chr06: 50411643-50412142 Eucalyptus grandis
Eucgr.F03961 0.5kb downstream 0.5kb downstream 18093 true Chr06: 50393550-50411642 Eucalyptus grandis
Eucgr.F03961 0.5kb downstream 0.5kb downstream 500 false Chr06: 50393550-50394049 Eucalyptus grandis
Eucgr.F03961 1.0kb upstream 1.0kb upstream 18593 true Chr06: 50394050-50412642 Eucalyptus grandis
Eucgr.F03961 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50411643-50412642 Eucalyptus grandis
Eucgr.F03961 1.0kb downstream 1.0kb downstream 18593 true Chr06: 50393050-50411642 Eucalyptus grandis
Eucgr.F03961 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50393050-50394049 Eucalyptus grandis
Eucgr.F03961 2.0kb upstream 2.0kb upstream 19593 true Chr06: 50394050-50413642 Eucalyptus grandis
Eucgr.F03961 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50411643-50413642 Eucalyptus grandis
Eucgr.F03961 2.0kb downstream 2.0kb downstream 19593 true Chr06: 50392050-50411642 Eucalyptus grandis
Eucgr.F03961 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50392050-50394049 Eucalyptus grandis
Eucgr.F03961 5.0kb upstream 5.0kb upstream 22593 true Chr06: 50394050-50416642 Eucalyptus grandis
Eucgr.F03961 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50411643-50416642 Eucalyptus grandis
Eucgr.F03961 5.0kb downstream 5.0kb downstream 22593 true Chr06: 50389050-50411642 Eucalyptus grandis
Eucgr.F03961 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50389050-50394049 Eucalyptus grandis
Eucgr.F03961 10.0kb upstream 10.0kb upstream 27593 true Chr06: 50394050-50421642 Eucalyptus grandis
Eucgr.F03961 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50411643-50421642 Eucalyptus grandis
Eucgr.F03961 10.0kb downstream 10.0kb downstream 27593 true Chr06: 50384050-50411642 Eucalyptus grandis
Eucgr.F03961 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50384050-50394049 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065939 5270 Rosid View MSA
123741318 5271 Pentapetalae View MSA
122793883 5272 Eudicot View MSA
122042350 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346699 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.09154 0.0 14.7656    
cufflinks 1.53849 0.0 5.86312   Low
cufflinks 9.18353 0.0 26.6923    
cufflinks 2.61073 0.0 7.36874    
cufflinks 9.1089 0.0 27.6219    
cufflinks 9.17248 0.0 22.8359    

0 Strain