Gene : Eucgr.F03905 E. grandis v2.0
Defline:  (1 of 2) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase Genomic Order:  3471
Name:  ? Eucgr.F03905 Secondary Identifier:  ? PAC:32054183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03905 0.5kb upstream 0.5kb upstream 5653 true Chr06: 49817677-49823329 Eucalyptus grandis
Eucgr.F03905 0.5kb upstream 0.5kb upstream 500 false Chr06: 49822830-49823329 Eucalyptus grandis
Eucgr.F03905 0.5kb downstream 0.5kb downstream 5653 true Chr06: 49817177-49822829 Eucalyptus grandis
Eucgr.F03905 0.5kb downstream 0.5kb downstream 500 false Chr06: 49817177-49817676 Eucalyptus grandis
Eucgr.F03905 1.0kb upstream 1.0kb upstream 6153 true Chr06: 49817677-49823829 Eucalyptus grandis
Eucgr.F03905 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49822830-49823829 Eucalyptus grandis
Eucgr.F03905 1.0kb downstream 1.0kb downstream 6153 true Chr06: 49816677-49822829 Eucalyptus grandis
Eucgr.F03905 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49816677-49817676 Eucalyptus grandis
Eucgr.F03905 2.0kb upstream 2.0kb upstream 7153 true Chr06: 49817677-49824829 Eucalyptus grandis
Eucgr.F03905 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49822830-49824829 Eucalyptus grandis
Eucgr.F03905 2.0kb downstream 2.0kb downstream 7153 true Chr06: 49815677-49822829 Eucalyptus grandis
Eucgr.F03905 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49815677-49817676 Eucalyptus grandis
Eucgr.F03905 5.0kb upstream 5.0kb upstream 10153 true Chr06: 49817677-49827829 Eucalyptus grandis
Eucgr.F03905 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49822830-49827829 Eucalyptus grandis
Eucgr.F03905 5.0kb downstream 5.0kb downstream 10153 true Chr06: 49812677-49822829 Eucalyptus grandis
Eucgr.F03905 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49812677-49817676 Eucalyptus grandis
Eucgr.F03905 10.0kb upstream 10.0kb upstream 15153 true Chr06: 49817677-49832829 Eucalyptus grandis
Eucgr.F03905 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49822830-49832829 Eucalyptus grandis
Eucgr.F03905 10.0kb downstream 10.0kb downstream 15153 true Chr06: 49807677-49822829 Eucalyptus grandis
Eucgr.F03905 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49807677-49817676 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069357 5270 Rosid View MSA
123741491 5271 Pentapetalae View MSA
122770061 5272 Eudicot View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.2864 0.0 19.0111    
cufflinks 1.85575 0.0 4.90359   Low
cufflinks 7.02707 0.0 16.2832    
cufflinks 7.68951 0.0 17.6669    
cufflinks 19.1769 0.0 42.4669   High
cufflinks 3.14173 0.0 7.88494    

0 Strain