Gene : Eucgr.F03878 E. grandis v2.0
Defline:  (1 of 2) PTHR13780:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-LIKE PV42A-RELATED Genomic Order:  3451
Name:  ? Eucgr.F03878 Secondary Identifier:  ? PAC:32052764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03878 0.5kb upstream 0.5kb upstream 3158 true Chr06: 49487150-49490307 Eucalyptus grandis
Eucgr.F03878 0.5kb upstream 0.5kb upstream 500 false Chr06: 49489808-49490307 Eucalyptus grandis
Eucgr.F03878 0.5kb downstream 0.5kb downstream 3158 true Chr06: 49486650-49489807 Eucalyptus grandis
Eucgr.F03878 0.5kb downstream 0.5kb downstream 500 false Chr06: 49486650-49487149 Eucalyptus grandis
Eucgr.F03878 1.0kb upstream 1.0kb upstream 3658 true Chr06: 49487150-49490807 Eucalyptus grandis
Eucgr.F03878 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49489808-49490807 Eucalyptus grandis
Eucgr.F03878 1.0kb downstream 1.0kb downstream 3658 true Chr06: 49486150-49489807 Eucalyptus grandis
Eucgr.F03878 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49486150-49487149 Eucalyptus grandis
Eucgr.F03878 2.0kb upstream 2.0kb upstream 4658 true Chr06: 49487150-49491807 Eucalyptus grandis
Eucgr.F03878 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49489808-49491807 Eucalyptus grandis
Eucgr.F03878 2.0kb downstream 2.0kb downstream 4658 true Chr06: 49485150-49489807 Eucalyptus grandis
Eucgr.F03878 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49485150-49487149 Eucalyptus grandis
Eucgr.F03878 5.0kb upstream 5.0kb upstream 7658 true Chr06: 49487150-49494807 Eucalyptus grandis
Eucgr.F03878 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49489808-49494807 Eucalyptus grandis
Eucgr.F03878 5.0kb downstream 5.0kb downstream 7658 true Chr06: 49482150-49489807 Eucalyptus grandis
Eucgr.F03878 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49482150-49487149 Eucalyptus grandis
Eucgr.F03878 10.0kb upstream 10.0kb upstream 12658 true Chr06: 49487150-49499807 Eucalyptus grandis
Eucgr.F03878 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49489808-49499807 Eucalyptus grandis
Eucgr.F03878 10.0kb downstream 10.0kb downstream 12658 true Chr06: 49477150-49489807 Eucalyptus grandis
Eucgr.F03878 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49477150-49487149 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061084 5270 Rosid View MSA
123738875 5271 Pentapetalae View MSA
122797482 5272 Eudicot View MSA
122042639 5273 Angiosperm View MSA
121347644 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.348739 0.0 1.18814 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.15418 0.0 5.92229    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.1721 0.0 5.95644    
cufflinks 2.6177 0.0 7.03525    

0 Strain