Gene : Eucgr.F03884 E. grandis v2.0
Defline:  (1 of 3) PTHR11564:SF5 - SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN Genomic Order:  3456
Name:  ? Eucgr.F03884 Secondary Identifier:  ? PAC:32054060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03884 0.5kb upstream 0.5kb upstream 10090 true Chr06: 49526138-49536227 Eucalyptus grandis
Eucgr.F03884 0.5kb upstream 0.5kb upstream 500 false Chr06: 49526138-49526637 Eucalyptus grandis
Eucgr.F03884 0.5kb downstream 0.5kb downstream 10090 true Chr06: 49526638-49536727 Eucalyptus grandis
Eucgr.F03884 0.5kb downstream 0.5kb downstream 500 false Chr06: 49536228-49536727 Eucalyptus grandis
Eucgr.F03884 1.0kb upstream 1.0kb upstream 10590 true Chr06: 49525638-49536227 Eucalyptus grandis
Eucgr.F03884 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49525638-49526637 Eucalyptus grandis
Eucgr.F03884 1.0kb downstream 1.0kb downstream 10590 true Chr06: 49526638-49537227 Eucalyptus grandis
Eucgr.F03884 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49536228-49537227 Eucalyptus grandis
Eucgr.F03884 2.0kb upstream 2.0kb upstream 11590 true Chr06: 49524638-49536227 Eucalyptus grandis
Eucgr.F03884 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49524638-49526637 Eucalyptus grandis
Eucgr.F03884 2.0kb downstream 2.0kb downstream 11590 true Chr06: 49526638-49538227 Eucalyptus grandis
Eucgr.F03884 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49536228-49538227 Eucalyptus grandis
Eucgr.F03884 5.0kb upstream 5.0kb upstream 14590 true Chr06: 49521638-49536227 Eucalyptus grandis
Eucgr.F03884 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49521638-49526637 Eucalyptus grandis
Eucgr.F03884 5.0kb downstream 5.0kb downstream 14590 true Chr06: 49526638-49541227 Eucalyptus grandis
Eucgr.F03884 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49536228-49541227 Eucalyptus grandis
Eucgr.F03884 10.0kb upstream 10.0kb upstream 19590 true Chr06: 49516638-49536227 Eucalyptus grandis
Eucgr.F03884 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49516638-49526637 Eucalyptus grandis
Eucgr.F03884 10.0kb downstream 10.0kb downstream 19590 true Chr06: 49526638-49546227 Eucalyptus grandis
Eucgr.F03884 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49536228-49546227 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.0231 0.0 71.7998    
cufflinks 20.1388 0.0 57.3465    
cufflinks 22.1309 0.0 64.9274    
cufflinks 25.8274 0.0 71.645    
cufflinks 19.0972 0.0 52.6836   Low
cufflinks 34.6418 0.0 101.796 High High

0 Strain