Gene : Eucgr.F03886 E. grandis v2.0
Defline:  (1 of 1) PTHR10555//PTHR10555:SF154 - SORTING NEXIN Genomic Order:  3458
Name:  ? Eucgr.F03886 Secondary Identifier:  ? PAC:32056230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03886 0.5kb upstream 0.5kb upstream 7371 true Chr06: 49546120-49553490 Eucalyptus grandis
Eucgr.F03886 0.5kb upstream 0.5kb upstream 500 false Chr06: 49546120-49546619 Eucalyptus grandis
Eucgr.F03886 0.5kb downstream 0.5kb downstream 7371 true Chr06: 49546620-49553990 Eucalyptus grandis
Eucgr.F03886 0.5kb downstream 0.5kb downstream 500 false Chr06: 49553491-49553990 Eucalyptus grandis
Eucgr.F03886 1.0kb upstream 1.0kb upstream 7871 true Chr06: 49545620-49553490 Eucalyptus grandis
Eucgr.F03886 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49545620-49546619 Eucalyptus grandis
Eucgr.F03886 1.0kb downstream 1.0kb downstream 7871 true Chr06: 49546620-49554490 Eucalyptus grandis
Eucgr.F03886 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49553491-49554490 Eucalyptus grandis
Eucgr.F03886 2.0kb upstream 2.0kb upstream 8871 true Chr06: 49544620-49553490 Eucalyptus grandis
Eucgr.F03886 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49544620-49546619 Eucalyptus grandis
Eucgr.F03886 2.0kb downstream 2.0kb downstream 8871 true Chr06: 49546620-49555490 Eucalyptus grandis
Eucgr.F03886 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49553491-49555490 Eucalyptus grandis
Eucgr.F03886 5.0kb upstream 5.0kb upstream 11871 true Chr06: 49541620-49553490 Eucalyptus grandis
Eucgr.F03886 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49541620-49546619 Eucalyptus grandis
Eucgr.F03886 5.0kb downstream 5.0kb downstream 11871 true Chr06: 49546620-49558490 Eucalyptus grandis
Eucgr.F03886 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49553491-49558490 Eucalyptus grandis
Eucgr.F03886 10.0kb upstream 10.0kb upstream 16871 true Chr06: 49536620-49553490 Eucalyptus grandis
Eucgr.F03886 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49536620-49546619 Eucalyptus grandis
Eucgr.F03886 10.0kb downstream 10.0kb downstream 16871 true Chr06: 49546620-49563490 Eucalyptus grandis
Eucgr.F03886 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49553491-49563490 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072497 5270 Rosid View MSA
123742231 5271 Pentapetalae View MSA
122788669 5272 Eudicot View MSA
122047389 5273 Angiosperm View MSA
121347032 5274 Embryophyte View MSA
123428611 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.12692 0.0 12.1396    
cufflinks 5.35255 0.0 12.5194    
cufflinks 4.48963 0.0 10.7047    
cufflinks 8.21998 0.0 20.6505   High
cufflinks 4.41679 0.0 10.5591    
cufflinks 3.93545 0.0 9.83351   Low

0 Strain