Gene : Eucgr.F03852 E. grandis v2.0
Defline:  (1 of 1) PF10664 - Cyanobacterial and plastid NDH-1 subunit M (NdhM) Genomic Order:  3429
Name:  ? Eucgr.F03852 Secondary Identifier:  ? PAC:32056971
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03852 0.5kb upstream 0.5kb upstream 2041 true Chr06: 49260460-49262500 Eucalyptus grandis
Eucgr.F03852 0.5kb upstream 0.5kb upstream 500 false Chr06: 49260460-49260959 Eucalyptus grandis
Eucgr.F03852 0.5kb downstream 0.5kb downstream 2041 true Chr06: 49260960-49263000 Eucalyptus grandis
Eucgr.F03852 0.5kb downstream 0.5kb downstream 500 false Chr06: 49262501-49263000 Eucalyptus grandis
Eucgr.F03852 1.0kb upstream 1.0kb upstream 2541 true Chr06: 49259960-49262500 Eucalyptus grandis
Eucgr.F03852 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49259960-49260959 Eucalyptus grandis
Eucgr.F03852 1.0kb downstream 1.0kb downstream 2541 true Chr06: 49260960-49263500 Eucalyptus grandis
Eucgr.F03852 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49262501-49263500 Eucalyptus grandis
Eucgr.F03852 2.0kb upstream 2.0kb upstream 3541 true Chr06: 49258960-49262500 Eucalyptus grandis
Eucgr.F03852 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49258960-49260959 Eucalyptus grandis
Eucgr.F03852 2.0kb downstream 2.0kb downstream 3541 true Chr06: 49260960-49264500 Eucalyptus grandis
Eucgr.F03852 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49262501-49264500 Eucalyptus grandis
Eucgr.F03852 5.0kb upstream 5.0kb upstream 6541 true Chr06: 49255960-49262500 Eucalyptus grandis
Eucgr.F03852 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49255960-49260959 Eucalyptus grandis
Eucgr.F03852 5.0kb downstream 5.0kb downstream 6541 true Chr06: 49260960-49267500 Eucalyptus grandis
Eucgr.F03852 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49262501-49267500 Eucalyptus grandis
Eucgr.F03852 10.0kb upstream 10.0kb upstream 11541 true Chr06: 49250960-49262500 Eucalyptus grandis
Eucgr.F03852 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49250960-49260959 Eucalyptus grandis
Eucgr.F03852 10.0kb downstream 10.0kb downstream 11541 true Chr06: 49260960-49272500 Eucalyptus grandis
Eucgr.F03852 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49262501-49272500 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065919 5270 Rosid View MSA
123737483 5271 Pentapetalae View MSA
122788912 5272 Eudicot View MSA
122048776 5273 Angiosperm View MSA
121347175 5274 Embryophyte View MSA
123380502 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.752489 0.0 2.34103    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.22041 0.0 3.59466    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.6486 0.0 37.9639   High

0 Strain