Gene : Eucgr.F03840 E. grandis v2.0
Defline:  (1 of 1) PTHR20275:SF6 - NADH KINASE POS5, MITOCHONDRIAL Genomic Order:  3420
Name:  ? Eucgr.F03840 Secondary Identifier:  ? PAC:32056389
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03840 0.5kb upstream 0.5kb upstream 6679 true Chr06: 49125464-49132142 Eucalyptus grandis
Eucgr.F03840 0.5kb upstream 0.5kb upstream 500 false Chr06: 49131643-49132142 Eucalyptus grandis
Eucgr.F03840 0.5kb downstream 0.5kb downstream 6679 true Chr06: 49124964-49131642 Eucalyptus grandis
Eucgr.F03840 0.5kb downstream 0.5kb downstream 500 false Chr06: 49124964-49125463 Eucalyptus grandis
Eucgr.F03840 1.0kb upstream 1.0kb upstream 7179 true Chr06: 49125464-49132642 Eucalyptus grandis
Eucgr.F03840 1.0kb upstream 1.0kb upstream 1000 false Chr06: 49131643-49132642 Eucalyptus grandis
Eucgr.F03840 1.0kb downstream 1.0kb downstream 7179 true Chr06: 49124464-49131642 Eucalyptus grandis
Eucgr.F03840 1.0kb downstream 1.0kb downstream 1000 false Chr06: 49124464-49125463 Eucalyptus grandis
Eucgr.F03840 2.0kb upstream 2.0kb upstream 8179 true Chr06: 49125464-49133642 Eucalyptus grandis
Eucgr.F03840 2.0kb upstream 2.0kb upstream 2000 false Chr06: 49131643-49133642 Eucalyptus grandis
Eucgr.F03840 2.0kb downstream 2.0kb downstream 8179 true Chr06: 49123464-49131642 Eucalyptus grandis
Eucgr.F03840 2.0kb downstream 2.0kb downstream 2000 false Chr06: 49123464-49125463 Eucalyptus grandis
Eucgr.F03840 5.0kb upstream 5.0kb upstream 11179 true Chr06: 49125464-49136642 Eucalyptus grandis
Eucgr.F03840 5.0kb upstream 5.0kb upstream 5000 false Chr06: 49131643-49136642 Eucalyptus grandis
Eucgr.F03840 5.0kb downstream 5.0kb downstream 11179 true Chr06: 49120464-49131642 Eucalyptus grandis
Eucgr.F03840 5.0kb downstream 5.0kb downstream 5000 false Chr06: 49120464-49125463 Eucalyptus grandis
Eucgr.F03840 10.0kb upstream 10.0kb upstream 16179 true Chr06: 49125464-49141642 Eucalyptus grandis
Eucgr.F03840 10.0kb upstream 10.0kb upstream 10000 false Chr06: 49131643-49141642 Eucalyptus grandis
Eucgr.F03840 10.0kb downstream 10.0kb downstream 16179 true Chr06: 49115464-49131642 Eucalyptus grandis
Eucgr.F03840 10.0kb downstream 10.0kb downstream 10000 false Chr06: 49115464-49125463 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068883 5270 Rosid View MSA
123747972 5271 Pentapetalae View MSA
122793469 5272 Eudicot View MSA
122042984 5273 Angiosperm View MSA
121349739 5274 Embryophyte View MSA
123425454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.84228 0.0 6.96333    
cufflinks 1.31589 0.0 3.63252    
cufflinks 3.54675 0.0 8.38818    
cufflinks 1.26887 0.0 3.49541    
cufflinks 2.12306 0.0 5.36835    
cufflinks 12.4292 0.0 28.1296   High

0 Strain