Gene : Eucgr.F03811 E. grandis v2.0
Defline:  (1 of 1) PTHR10242:SF2 - N-GLYCOSYLASE/DNA LYASE Genomic Order:  3398
Name:  ? Eucgr.F03811 Secondary Identifier:  ? PAC:32055619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03811 0.5kb upstream 0.5kb upstream 3603 true Chr06: 48810431-48814033 Eucalyptus grandis
Eucgr.F03811 0.5kb upstream 0.5kb upstream 500 false Chr06: 48813534-48814033 Eucalyptus grandis
Eucgr.F03811 0.5kb downstream 0.5kb downstream 3603 true Chr06: 48809931-48813533 Eucalyptus grandis
Eucgr.F03811 0.5kb downstream 0.5kb downstream 500 false Chr06: 48809931-48810430 Eucalyptus grandis
Eucgr.F03811 1.0kb upstream 1.0kb upstream 4103 true Chr06: 48810431-48814533 Eucalyptus grandis
Eucgr.F03811 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48813534-48814533 Eucalyptus grandis
Eucgr.F03811 1.0kb downstream 1.0kb downstream 4103 true Chr06: 48809431-48813533 Eucalyptus grandis
Eucgr.F03811 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48809431-48810430 Eucalyptus grandis
Eucgr.F03811 2.0kb upstream 2.0kb upstream 5103 true Chr06: 48810431-48815533 Eucalyptus grandis
Eucgr.F03811 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48813534-48815533 Eucalyptus grandis
Eucgr.F03811 2.0kb downstream 2.0kb downstream 5103 true Chr06: 48808431-48813533 Eucalyptus grandis
Eucgr.F03811 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48808431-48810430 Eucalyptus grandis
Eucgr.F03811 5.0kb upstream 5.0kb upstream 8103 true Chr06: 48810431-48818533 Eucalyptus grandis
Eucgr.F03811 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48813534-48818533 Eucalyptus grandis
Eucgr.F03811 5.0kb downstream 5.0kb downstream 8103 true Chr06: 48805431-48813533 Eucalyptus grandis
Eucgr.F03811 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48805431-48810430 Eucalyptus grandis
Eucgr.F03811 10.0kb upstream 10.0kb upstream 13103 true Chr06: 48810431-48823533 Eucalyptus grandis
Eucgr.F03811 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48813534-48823533 Eucalyptus grandis
Eucgr.F03811 10.0kb downstream 10.0kb downstream 13103 true Chr06: 48800431-48813533 Eucalyptus grandis
Eucgr.F03811 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48800431-48810430 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067306 5270 Rosid View MSA
123738201 5271 Pentapetalae View MSA
122792790 5272 Eudicot View MSA
122046442 5273 Angiosperm View MSA
121344747 5274 Embryophyte View MSA
123428453 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.51511 0.0 13.8348    
cufflinks 6.74441 0.0 16.1653    
cufflinks 7.95944 0.0 18.8737    
cufflinks 8.69318 0.0 20.383    
cufflinks 2.30626 0.0 8.81849   Low
cufflinks 6.90777 0.0 16.5461    

0 Strain