Gene : Eucgr.F03806 E. grandis v2.0
Defline:  (1 of 1) PTHR23315:SF135 - ARMADILLO/BETA-CATENIN-LIKE REPEAT AND C2 CALCIUM/LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3394
Name:  ? Eucgr.F03806 Secondary Identifier:  ? PAC:32054795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03806 0.5kb upstream 0.5kb upstream 11078 true Chr06: 48765564-48776641 Eucalyptus grandis
Eucgr.F03806 0.5kb upstream 0.5kb upstream 500 false Chr06: 48776142-48776641 Eucalyptus grandis
Eucgr.F03806 0.5kb downstream 0.5kb downstream 11078 true Chr06: 48765064-48776141 Eucalyptus grandis
Eucgr.F03806 0.5kb downstream 0.5kb downstream 500 false Chr06: 48765064-48765563 Eucalyptus grandis
Eucgr.F03806 1.0kb upstream 1.0kb upstream 11578 true Chr06: 48765564-48777141 Eucalyptus grandis
Eucgr.F03806 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48776142-48777141 Eucalyptus grandis
Eucgr.F03806 1.0kb downstream 1.0kb downstream 11578 true Chr06: 48764564-48776141 Eucalyptus grandis
Eucgr.F03806 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48764564-48765563 Eucalyptus grandis
Eucgr.F03806 2.0kb upstream 2.0kb upstream 12578 true Chr06: 48765564-48778141 Eucalyptus grandis
Eucgr.F03806 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48776142-48778141 Eucalyptus grandis
Eucgr.F03806 2.0kb downstream 2.0kb downstream 12578 true Chr06: 48763564-48776141 Eucalyptus grandis
Eucgr.F03806 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48763564-48765563 Eucalyptus grandis
Eucgr.F03806 5.0kb upstream 5.0kb upstream 15578 true Chr06: 48765564-48781141 Eucalyptus grandis
Eucgr.F03806 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48776142-48781141 Eucalyptus grandis
Eucgr.F03806 5.0kb downstream 5.0kb downstream 15578 true Chr06: 48760564-48776141 Eucalyptus grandis
Eucgr.F03806 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48760564-48765563 Eucalyptus grandis
Eucgr.F03806 10.0kb upstream 10.0kb upstream 20578 true Chr06: 48765564-48786141 Eucalyptus grandis
Eucgr.F03806 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48776142-48786141 Eucalyptus grandis
Eucgr.F03806 10.0kb downstream 10.0kb downstream 20578 true Chr06: 48755564-48776141 Eucalyptus grandis
Eucgr.F03806 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48755564-48765563 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
124062607 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.76753 0.0 10.5913   Low
cufflinks 11.733 0.0 26.2388   High
cufflinks 5.73429 0.0 12.69    
cufflinks 5.96224 0.0 13.1868    
cufflinks 6.93476 0.0 15.3364    
cufflinks 6.33349 0.0 14.0179    

0 Strain