Gene : Eucgr.F03779 E. grandis v2.0
Defline:  (1 of 2) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) / Rer2p Z-prenyltransferase Genomic Order:  3368
Name:  ? Eucgr.F03779 Secondary Identifier:  ? PAC:32052811
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6129 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03779 0.5kb upstream 0.5kb upstream 11898 true Chr06: 48483149-48495046 Eucalyptus grandis
Eucgr.F03779 0.5kb upstream 0.5kb upstream 500 false Chr06: 48494547-48495046 Eucalyptus grandis
Eucgr.F03779 0.5kb downstream 0.5kb downstream 11898 true Chr06: 48482649-48494546 Eucalyptus grandis
Eucgr.F03779 0.5kb downstream 0.5kb downstream 500 false Chr06: 48482649-48483148 Eucalyptus grandis
Eucgr.F03779 1.0kb upstream 1.0kb upstream 12398 true Chr06: 48483149-48495546 Eucalyptus grandis
Eucgr.F03779 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48494547-48495546 Eucalyptus grandis
Eucgr.F03779 1.0kb downstream 1.0kb downstream 12398 true Chr06: 48482149-48494546 Eucalyptus grandis
Eucgr.F03779 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48482149-48483148 Eucalyptus grandis
Eucgr.F03779 2.0kb upstream 2.0kb upstream 13398 true Chr06: 48483149-48496546 Eucalyptus grandis
Eucgr.F03779 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48494547-48496546 Eucalyptus grandis
Eucgr.F03779 2.0kb downstream 2.0kb downstream 13398 true Chr06: 48481149-48494546 Eucalyptus grandis
Eucgr.F03779 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48481149-48483148 Eucalyptus grandis
Eucgr.F03779 5.0kb upstream 5.0kb upstream 16398 true Chr06: 48483149-48499546 Eucalyptus grandis
Eucgr.F03779 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48494547-48499546 Eucalyptus grandis
Eucgr.F03779 5.0kb downstream 5.0kb downstream 16398 true Chr06: 48478149-48494546 Eucalyptus grandis
Eucgr.F03779 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48478149-48483148 Eucalyptus grandis
Eucgr.F03779 10.0kb upstream 10.0kb upstream 21398 true Chr06: 48483149-48504546 Eucalyptus grandis
Eucgr.F03779 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48494547-48504546 Eucalyptus grandis
Eucgr.F03779 10.0kb downstream 10.0kb downstream 21398 true Chr06: 48473149-48494546 Eucalyptus grandis
Eucgr.F03779 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48473149-48483148 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061993 5270 Rosid View MSA
123744162 5271 Pentapetalae View MSA
122791831 5272 Eudicot View MSA
122045568 5273 Angiosperm View MSA
121310466 5274 Embryophyte View MSA
123347940 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.86993 0.0 20.1749    
cufflinks 1.80936 0.0 5.30437   Low
cufflinks 4.53757 0.0 17.2047    
cufflinks 3.42988 0.0 12.7232    
cufflinks 9.68774 0.0 29.9838   High
cufflinks 3.60961 0.0 11.0998    

0 Strain