Gene : Eucgr.H00930 E. grandis v2.0
Defline:  (1 of 1) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  498
Name:  ? Eucgr.H00930 Secondary Identifier:  ? PAC:32055202
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00930 0.5kb upstream 0.5kb upstream 8609 true Chr06: 7673833-7682441 Eucalyptus grandis
Eucgr.H00930 0.5kb upstream 0.5kb upstream 500 false Chr06: 7673833-7674332 Eucalyptus grandis
Eucgr.H00930 0.5kb downstream 0.5kb downstream 8609 true Chr06: 7674333-7682941 Eucalyptus grandis
Eucgr.H00930 0.5kb downstream 0.5kb downstream 500 false Chr06: 7682442-7682941 Eucalyptus grandis
Eucgr.H00930 1.0kb upstream 1.0kb upstream 9109 true Chr06: 7673333-7682441 Eucalyptus grandis
Eucgr.H00930 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7673333-7674332 Eucalyptus grandis
Eucgr.H00930 1.0kb downstream 1.0kb downstream 9109 true Chr06: 7674333-7683441 Eucalyptus grandis
Eucgr.H00930 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7682442-7683441 Eucalyptus grandis
Eucgr.H00930 2.0kb upstream 2.0kb upstream 10109 true Chr06: 7672333-7682441 Eucalyptus grandis
Eucgr.H00930 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7672333-7674332 Eucalyptus grandis
Eucgr.H00930 2.0kb downstream 2.0kb downstream 10109 true Chr06: 7674333-7684441 Eucalyptus grandis
Eucgr.H00930 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7682442-7684441 Eucalyptus grandis
Eucgr.H00930 5.0kb upstream 5.0kb upstream 13109 true Chr06: 7669333-7682441 Eucalyptus grandis
Eucgr.H00930 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7669333-7674332 Eucalyptus grandis
Eucgr.H00930 5.0kb downstream 5.0kb downstream 13109 true Chr06: 7674333-7687441 Eucalyptus grandis
Eucgr.H00930 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7682442-7687441 Eucalyptus grandis
Eucgr.H00930 10.0kb upstream 10.0kb upstream 18109 true Chr06: 7664333-7682441 Eucalyptus grandis
Eucgr.H00930 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7664333-7674332 Eucalyptus grandis
Eucgr.H00930 10.0kb downstream 10.0kb downstream 18109 true Chr06: 7674333-7692441 Eucalyptus grandis
Eucgr.H00930 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7682442-7692441 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041351 5273 Angiosperm View MSA
124068509 5270 Rosid View MSA
123739960 5271 Pentapetalae View MSA
122791365 5272 Eudicot View MSA
121346749 5274 Embryophyte View MSA
123424526 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.5668 0.0 37.3324   Low
cufflinks 21.0078 0.0 47.1682    
cufflinks 17.1445 0.0 47.8981    
cufflinks 24.8272 0.0 66.5819   High
cufflinks 18.6537 0.0 50.3548    
cufflinks 25.7319 0.0 83.0817   High

0 Strain