Gene : Eucgr.H00928 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  496
Name:  ? Eucgr.H00928 Secondary Identifier:  ? PAC:32052743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00928 0.5kb upstream 0.5kb upstream 2536 true Chr06: 7658803-7661338 Eucalyptus grandis
Eucgr.H00928 0.5kb upstream 0.5kb upstream 500 false Chr06: 7660839-7661338 Eucalyptus grandis
Eucgr.H00928 0.5kb downstream 0.5kb downstream 2536 true Chr06: 7658303-7660838 Eucalyptus grandis
Eucgr.H00928 0.5kb downstream 0.5kb downstream 500 false Chr06: 7658303-7658802 Eucalyptus grandis
Eucgr.H00928 1.0kb upstream 1.0kb upstream 3036 true Chr06: 7658803-7661838 Eucalyptus grandis
Eucgr.H00928 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7660839-7661838 Eucalyptus grandis
Eucgr.H00928 1.0kb downstream 1.0kb downstream 3036 true Chr06: 7657803-7660838 Eucalyptus grandis
Eucgr.H00928 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7657803-7658802 Eucalyptus grandis
Eucgr.H00928 2.0kb upstream 2.0kb upstream 4036 true Chr06: 7658803-7662838 Eucalyptus grandis
Eucgr.H00928 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7660839-7662838 Eucalyptus grandis
Eucgr.H00928 2.0kb downstream 2.0kb downstream 4036 true Chr06: 7656803-7660838 Eucalyptus grandis
Eucgr.H00928 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7656803-7658802 Eucalyptus grandis
Eucgr.H00928 5.0kb upstream 5.0kb upstream 7036 true Chr06: 7658803-7665838 Eucalyptus grandis
Eucgr.H00928 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7660839-7665838 Eucalyptus grandis
Eucgr.H00928 5.0kb downstream 5.0kb downstream 7036 true Chr06: 7653803-7660838 Eucalyptus grandis
Eucgr.H00928 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7653803-7658802 Eucalyptus grandis
Eucgr.H00928 10.0kb upstream 10.0kb upstream 12036 true Chr06: 7658803-7670838 Eucalyptus grandis
Eucgr.H00928 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7660839-7670838 Eucalyptus grandis
Eucgr.H00928 10.0kb downstream 10.0kb downstream 12036 true Chr06: 7648803-7660838 Eucalyptus grandis
Eucgr.H00928 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7648803-7658802 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065193 5270 Rosid View MSA
123739429 5271 Pentapetalae View MSA
122786943 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.946013 0.0 2.68468    
cufflinks 1.17366 0.0 3.22746    
cufflinks 1.20411 0.0 3.31035    
cufflinks 0.435437 0.0 1.32782    
cufflinks 0.20998 0.0 0.71086 Low Low
cufflinks 1.39386 0.0 3.82989    

0 Strain