Gene : Eucgr.H00920 E. grandis v2.0
Defline:  (1 of 4) PTHR13169 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  489
Name:  ? Eucgr.H00920 Secondary Identifier:  ? PAC:32054084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00920 0.5kb upstream 0.5kb upstream 4294 true Chr06: 7575005-7579298 Eucalyptus grandis
Eucgr.H00920 0.5kb upstream 0.5kb upstream 500 false Chr06: 7575005-7575504 Eucalyptus grandis
Eucgr.H00920 0.5kb downstream 0.5kb downstream 4294 true Chr06: 7575505-7579798 Eucalyptus grandis
Eucgr.H00920 0.5kb downstream 0.5kb downstream 500 false Chr06: 7579299-7579798 Eucalyptus grandis
Eucgr.H00920 1.0kb upstream 1.0kb upstream 4794 true Chr06: 7574505-7579298 Eucalyptus grandis
Eucgr.H00920 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7574505-7575504 Eucalyptus grandis
Eucgr.H00920 1.0kb downstream 1.0kb downstream 4794 true Chr06: 7575505-7580298 Eucalyptus grandis
Eucgr.H00920 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7579299-7580298 Eucalyptus grandis
Eucgr.H00920 2.0kb upstream 2.0kb upstream 5794 true Chr06: 7573505-7579298 Eucalyptus grandis
Eucgr.H00920 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7573505-7575504 Eucalyptus grandis
Eucgr.H00920 2.0kb downstream 2.0kb downstream 5794 true Chr06: 7575505-7581298 Eucalyptus grandis
Eucgr.H00920 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7579299-7581298 Eucalyptus grandis
Eucgr.H00920 5.0kb upstream 5.0kb upstream 8794 true Chr06: 7570505-7579298 Eucalyptus grandis
Eucgr.H00920 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7570505-7575504 Eucalyptus grandis
Eucgr.H00920 5.0kb downstream 5.0kb downstream 8794 true Chr06: 7575505-7584298 Eucalyptus grandis
Eucgr.H00920 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7579299-7584298 Eucalyptus grandis
Eucgr.H00920 10.0kb upstream 10.0kb upstream 13794 true Chr06: 7565505-7579298 Eucalyptus grandis
Eucgr.H00920 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7565505-7575504 Eucalyptus grandis
Eucgr.H00920 10.0kb downstream 10.0kb downstream 13794 true Chr06: 7575505-7589298 Eucalyptus grandis
Eucgr.H00920 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7579299-7589298 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2973 0.0 41.1885    
cufflinks 53.5662 0.0 128.338 High High
cufflinks 9.09476 0.0 31.926   Low
cufflinks 55.8572 0.0 134.483 High High
cufflinks 33.3992 0.0 76.8449    
cufflinks 15.2954 0.0 42.5395    

0 Strain