Gene : Eucgr.F04475 E. grandis v2.0
Defline:  (1 of 1) PTHR31499:SF2 - MYB FAMILY TRANSCRIPTION FACTOR APL Genomic Order:  4038
Name:  ? Eucgr.F04475 Secondary Identifier:  ? PAC:32055892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04475 0.5kb upstream 0.5kb upstream 2908 true Chr06: 57275536-57278443 Eucalyptus grandis
Eucgr.F04475 0.5kb upstream 0.5kb upstream 500 false Chr06: 57275536-57276035 Eucalyptus grandis
Eucgr.F04475 0.5kb downstream 0.5kb downstream 2908 true Chr06: 57276036-57278943 Eucalyptus grandis
Eucgr.F04475 0.5kb downstream 0.5kb downstream 500 false Chr06: 57278444-57278943 Eucalyptus grandis
Eucgr.F04475 1.0kb upstream 1.0kb upstream 3408 true Chr06: 57275036-57278443 Eucalyptus grandis
Eucgr.F04475 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57275036-57276035 Eucalyptus grandis
Eucgr.F04475 1.0kb downstream 1.0kb downstream 3408 true Chr06: 57276036-57279443 Eucalyptus grandis
Eucgr.F04475 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57278444-57279443 Eucalyptus grandis
Eucgr.F04475 2.0kb upstream 2.0kb upstream 4408 true Chr06: 57274036-57278443 Eucalyptus grandis
Eucgr.F04475 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57274036-57276035 Eucalyptus grandis
Eucgr.F04475 2.0kb downstream 2.0kb downstream 4408 true Chr06: 57276036-57280443 Eucalyptus grandis
Eucgr.F04475 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57278444-57280443 Eucalyptus grandis
Eucgr.F04475 5.0kb upstream 5.0kb upstream 7408 true Chr06: 57271036-57278443 Eucalyptus grandis
Eucgr.F04475 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57271036-57276035 Eucalyptus grandis
Eucgr.F04475 5.0kb downstream 5.0kb downstream 7408 true Chr06: 57276036-57283443 Eucalyptus grandis
Eucgr.F04475 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57278444-57283443 Eucalyptus grandis
Eucgr.F04475 10.0kb upstream 10.0kb upstream 12408 true Chr06: 57266036-57278443 Eucalyptus grandis
Eucgr.F04475 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57266036-57276035 Eucalyptus grandis
Eucgr.F04475 10.0kb downstream 10.0kb downstream 12408 true Chr06: 57276036-57288443 Eucalyptus grandis
Eucgr.F04475 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57278444-57288443 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061276 5270 Rosid View MSA
123738186 5271 Pentapetalae View MSA
122787106 5272 Eudicot View MSA
122046288 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.8315 0.0 11.9301    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.89525 0.0 15.567    
cufflinks 0.272195 0.0 1.15206 Low Low
cufflinks 10.0093 0.0 26.491    
cufflinks 9.84797 0.0 22.9336    

0 Strain