Gene : Eucgr.F04476 E. grandis v2.0
Defline:  (1 of 9) PF04788 - Protein of unknown function (DUF620) (DUF620) Genomic Order:  4039
Name:  ? Eucgr.F04476 Secondary Identifier:  ? PAC:32055097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04476 0.5kb upstream 0.5kb upstream 3385 true Chr06: 57282065-57285449 Eucalyptus grandis
Eucgr.F04476 0.5kb upstream 0.5kb upstream 500 false Chr06: 57284950-57285449 Eucalyptus grandis
Eucgr.F04476 0.5kb downstream 0.5kb downstream 3385 true Chr06: 57281565-57284949 Eucalyptus grandis
Eucgr.F04476 0.5kb downstream 0.5kb downstream 500 false Chr06: 57281565-57282064 Eucalyptus grandis
Eucgr.F04476 1.0kb upstream 1.0kb upstream 3885 true Chr06: 57282065-57285949 Eucalyptus grandis
Eucgr.F04476 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57284950-57285949 Eucalyptus grandis
Eucgr.F04476 1.0kb downstream 1.0kb downstream 3885 true Chr06: 57281065-57284949 Eucalyptus grandis
Eucgr.F04476 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57281065-57282064 Eucalyptus grandis
Eucgr.F04476 2.0kb upstream 2.0kb upstream 4885 true Chr06: 57282065-57286949 Eucalyptus grandis
Eucgr.F04476 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57284950-57286949 Eucalyptus grandis
Eucgr.F04476 2.0kb downstream 2.0kb downstream 4885 true Chr06: 57280065-57284949 Eucalyptus grandis
Eucgr.F04476 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57280065-57282064 Eucalyptus grandis
Eucgr.F04476 5.0kb upstream 5.0kb upstream 7885 true Chr06: 57282065-57289949 Eucalyptus grandis
Eucgr.F04476 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57284950-57289949 Eucalyptus grandis
Eucgr.F04476 5.0kb downstream 5.0kb downstream 7885 true Chr06: 57277065-57284949 Eucalyptus grandis
Eucgr.F04476 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57277065-57282064 Eucalyptus grandis
Eucgr.F04476 10.0kb upstream 10.0kb upstream 12885 true Chr06: 57282065-57294949 Eucalyptus grandis
Eucgr.F04476 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57284950-57294949 Eucalyptus grandis
Eucgr.F04476 10.0kb downstream 10.0kb downstream 12885 true Chr06: 57272065-57284949 Eucalyptus grandis
Eucgr.F04476 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57272065-57282064 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065577 5270 Rosid View MSA
123739517 5271 Pentapetalae View MSA
122769955 5272 Eudicot View MSA
122044240 5273 Angiosperm View MSA
121310259 5274 Embryophyte View MSA
123347798 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74008 0.0 4.79439    
cufflinks 29.406 0.0 65.1422   High
cufflinks 2.54246 0.0 6.82083    
cufflinks 11.1902 0.0 26.0732    
cufflinks 2.21714 0.0 5.98761    
cufflinks 3.54419 0.0 8.99127    

0 Strain