Gene : Eucgr.F04464 E. grandis v2.0
Defline:  (1 of 1) PF01464 - Transglycosylase SLT domain (SLT) Genomic Order:  4027
Name:  ? Eucgr.F04464 Secondary Identifier:  ? PAC:32052576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04464 0.5kb upstream 0.5kb upstream 5786 true Chr06: 57173198-57178983 Eucalyptus grandis
Eucgr.F04464 0.5kb upstream 0.5kb upstream 500 false Chr06: 57178484-57178983 Eucalyptus grandis
Eucgr.F04464 0.5kb downstream 0.5kb downstream 5786 true Chr06: 57172698-57178483 Eucalyptus grandis
Eucgr.F04464 0.5kb downstream 0.5kb downstream 500 false Chr06: 57172698-57173197 Eucalyptus grandis
Eucgr.F04464 1.0kb upstream 1.0kb upstream 6286 true Chr06: 57173198-57179483 Eucalyptus grandis
Eucgr.F04464 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57178484-57179483 Eucalyptus grandis
Eucgr.F04464 1.0kb downstream 1.0kb downstream 6286 true Chr06: 57172198-57178483 Eucalyptus grandis
Eucgr.F04464 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57172198-57173197 Eucalyptus grandis
Eucgr.F04464 2.0kb upstream 2.0kb upstream 7286 true Chr06: 57173198-57180483 Eucalyptus grandis
Eucgr.F04464 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57178484-57180483 Eucalyptus grandis
Eucgr.F04464 2.0kb downstream 2.0kb downstream 7286 true Chr06: 57171198-57178483 Eucalyptus grandis
Eucgr.F04464 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57171198-57173197 Eucalyptus grandis
Eucgr.F04464 5.0kb upstream 5.0kb upstream 10286 true Chr06: 57173198-57183483 Eucalyptus grandis
Eucgr.F04464 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57178484-57183483 Eucalyptus grandis
Eucgr.F04464 5.0kb downstream 5.0kb downstream 10286 true Chr06: 57168198-57178483 Eucalyptus grandis
Eucgr.F04464 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57168198-57173197 Eucalyptus grandis
Eucgr.F04464 10.0kb upstream 10.0kb upstream 15286 true Chr06: 57173198-57188483 Eucalyptus grandis
Eucgr.F04464 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57178484-57188483 Eucalyptus grandis
Eucgr.F04464 10.0kb downstream 10.0kb downstream 15286 true Chr06: 57163198-57178483 Eucalyptus grandis
Eucgr.F04464 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57163198-57173197 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026274 5273 Angiosperm View MSA
124063364 5270 Rosid View MSA
123738114 5271 Pentapetalae View MSA
122789993 5272 Eudicot View MSA
121350872 5274 Embryophyte View MSA
123381917 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.436853 0.0 1.41 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.270989 0.0 0.925607 Low Low
cufflinks 1.7528 0.0 4.78316    
cufflinks 2.03125 0.0 5.48559   High
cufflinks 0.468405 0.0 1.50642 Low  

0 Strain