Gene : Eucgr.F04466 E. grandis v2.0
Defline:  (1 of 2) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE Genomic Order:  4029
Name:  ? Eucgr.F04466 Secondary Identifier:  ? PAC:32055685
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis GLUCONEO-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY66-399 Eucalyptus grandis pathologic  
Egrandis SUCSYN-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04466 0.5kb upstream 0.5kb upstream 5412 true Chr06: 57183826-57189237 Eucalyptus grandis
Eucgr.F04466 0.5kb upstream 0.5kb upstream 500 false Chr06: 57183826-57184325 Eucalyptus grandis
Eucgr.F04466 0.5kb downstream 0.5kb downstream 5412 true Chr06: 57184326-57189737 Eucalyptus grandis
Eucgr.F04466 0.5kb downstream 0.5kb downstream 500 false Chr06: 57189238-57189737 Eucalyptus grandis
Eucgr.F04466 1.0kb upstream 1.0kb upstream 5912 true Chr06: 57183326-57189237 Eucalyptus grandis
Eucgr.F04466 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57183326-57184325 Eucalyptus grandis
Eucgr.F04466 1.0kb downstream 1.0kb downstream 5912 true Chr06: 57184326-57190237 Eucalyptus grandis
Eucgr.F04466 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57189238-57190237 Eucalyptus grandis
Eucgr.F04466 2.0kb upstream 2.0kb upstream 6912 true Chr06: 57182326-57189237 Eucalyptus grandis
Eucgr.F04466 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57182326-57184325 Eucalyptus grandis
Eucgr.F04466 2.0kb downstream 2.0kb downstream 6912 true Chr06: 57184326-57191237 Eucalyptus grandis
Eucgr.F04466 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57189238-57191237 Eucalyptus grandis
Eucgr.F04466 5.0kb upstream 5.0kb upstream 9912 true Chr06: 57179326-57189237 Eucalyptus grandis
Eucgr.F04466 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57179326-57184325 Eucalyptus grandis
Eucgr.F04466 5.0kb downstream 5.0kb downstream 9912 true Chr06: 57184326-57194237 Eucalyptus grandis
Eucgr.F04466 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57189238-57194237 Eucalyptus grandis
Eucgr.F04466 10.0kb upstream 10.0kb upstream 14912 true Chr06: 57174326-57189237 Eucalyptus grandis
Eucgr.F04466 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57174326-57184325 Eucalyptus grandis
Eucgr.F04466 10.0kb downstream 10.0kb downstream 14912 true Chr06: 57184326-57199237 Eucalyptus grandis
Eucgr.F04466 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57189238-57199237 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063810 5270 Rosid View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.9602 0.0 72.8914 High  
cufflinks 71.3902 0.0 161.045 High High
cufflinks 30.1832 0.0 66.765 High  
cufflinks 64.2183 0.0 144.079 High High
cufflinks 29.7381 0.0 65.7949    
cufflinks 22.9935 0.0 51.1462   Low

0 Strain