Gene : Eucgr.F04474 E. grandis v2.0
Defline:  (1 of 1) PTHR11699:SF49 - SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL Genomic Order:  4037
Name:  ? Eucgr.F04474 Secondary Identifier:  ? PAC:32056794
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis GLUDEG-I-PWY Eucalyptus grandis pathologic  
Egrandis PWY-4321 Eucalyptus grandis pathologic  
Egrandis PWY-6473 Eucalyptus grandis pathologic  
Egrandis PWY-6535 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04474 0.5kb upstream 0.5kb upstream 10095 true Chr06: 57262173-57272267 Eucalyptus grandis
Eucgr.F04474 0.5kb upstream 0.5kb upstream 500 false Chr06: 57262173-57262672 Eucalyptus grandis
Eucgr.F04474 0.5kb downstream 0.5kb downstream 10095 true Chr06: 57262673-57272767 Eucalyptus grandis
Eucgr.F04474 0.5kb downstream 0.5kb downstream 500 false Chr06: 57272268-57272767 Eucalyptus grandis
Eucgr.F04474 1.0kb upstream 1.0kb upstream 10595 true Chr06: 57261673-57272267 Eucalyptus grandis
Eucgr.F04474 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57261673-57262672 Eucalyptus grandis
Eucgr.F04474 1.0kb downstream 1.0kb downstream 10595 true Chr06: 57262673-57273267 Eucalyptus grandis
Eucgr.F04474 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57272268-57273267 Eucalyptus grandis
Eucgr.F04474 2.0kb upstream 2.0kb upstream 11595 true Chr06: 57260673-57272267 Eucalyptus grandis
Eucgr.F04474 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57260673-57262672 Eucalyptus grandis
Eucgr.F04474 2.0kb downstream 2.0kb downstream 11595 true Chr06: 57262673-57274267 Eucalyptus grandis
Eucgr.F04474 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57272268-57274267 Eucalyptus grandis
Eucgr.F04474 5.0kb upstream 5.0kb upstream 14595 true Chr06: 57257673-57272267 Eucalyptus grandis
Eucgr.F04474 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57257673-57262672 Eucalyptus grandis
Eucgr.F04474 5.0kb downstream 5.0kb downstream 14595 true Chr06: 57262673-57277267 Eucalyptus grandis
Eucgr.F04474 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57272268-57277267 Eucalyptus grandis
Eucgr.F04474 10.0kb upstream 10.0kb upstream 19595 true Chr06: 57252673-57272267 Eucalyptus grandis
Eucgr.F04474 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57252673-57262672 Eucalyptus grandis
Eucgr.F04474 10.0kb downstream 10.0kb downstream 19595 true Chr06: 57262673-57282267 Eucalyptus grandis
Eucgr.F04474 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57272268-57282267 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063190 5270 Rosid View MSA
123737868 5271 Pentapetalae View MSA
122769906 5272 Eudicot View MSA
122045886 5273 Angiosperm View MSA
121345720 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.2593 0.0 60.3245    
cufflinks 27.2005 0.0 60.2155    
cufflinks 25.2491 0.0 55.8555    
cufflinks 20.6588 0.0 45.69    
cufflinks 18.3036 0.0 40.5408   Low
cufflinks 27.769 0.0 61.4577    

0 Strain