Gene : Eucgr.F04448 E. grandis v2.0
Defline:  (1 of 1) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) Genomic Order:  4011
Name:  ? Eucgr.F04448 Secondary Identifier:  ? PAC:32057041
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04448 0.5kb upstream 0.5kb upstream 4106 true Chr06: 57045841-57049946 Eucalyptus grandis
Eucgr.F04448 0.5kb upstream 0.5kb upstream 500 false Chr06: 57045841-57046340 Eucalyptus grandis
Eucgr.F04448 0.5kb downstream 0.5kb downstream 4106 true Chr06: 57046341-57050446 Eucalyptus grandis
Eucgr.F04448 0.5kb downstream 0.5kb downstream 500 false Chr06: 57049947-57050446 Eucalyptus grandis
Eucgr.F04448 1.0kb upstream 1.0kb upstream 4606 true Chr06: 57045341-57049946 Eucalyptus grandis
Eucgr.F04448 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57045341-57046340 Eucalyptus grandis
Eucgr.F04448 1.0kb downstream 1.0kb downstream 4606 true Chr06: 57046341-57050946 Eucalyptus grandis
Eucgr.F04448 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57049947-57050946 Eucalyptus grandis
Eucgr.F04448 2.0kb upstream 2.0kb upstream 5606 true Chr06: 57044341-57049946 Eucalyptus grandis
Eucgr.F04448 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57044341-57046340 Eucalyptus grandis
Eucgr.F04448 2.0kb downstream 2.0kb downstream 5606 true Chr06: 57046341-57051946 Eucalyptus grandis
Eucgr.F04448 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57049947-57051946 Eucalyptus grandis
Eucgr.F04448 5.0kb upstream 5.0kb upstream 8606 true Chr06: 57041341-57049946 Eucalyptus grandis
Eucgr.F04448 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57041341-57046340 Eucalyptus grandis
Eucgr.F04448 5.0kb downstream 5.0kb downstream 8606 true Chr06: 57046341-57054946 Eucalyptus grandis
Eucgr.F04448 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57049947-57054946 Eucalyptus grandis
Eucgr.F04448 10.0kb upstream 10.0kb upstream 13606 true Chr06: 57036341-57049946 Eucalyptus grandis
Eucgr.F04448 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57036341-57046340 Eucalyptus grandis
Eucgr.F04448 10.0kb downstream 10.0kb downstream 13606 true Chr06: 57046341-57059946 Eucalyptus grandis
Eucgr.F04448 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57049947-57059946 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.1054 0.0 112.21 High  
cufflinks 66.3607 0.0 166.568 High  
cufflinks 42.2236 0.0 108.189 High  
cufflinks 80.9314 0.0 206.857 High  
cufflinks 112.315 0.0 295.155 High High
cufflinks 45.3307 0.0 101.764 High  

0 Strain