Gene : Eucgr.F04342 E. grandis v2.0
Defline:  (1 of 1) PTHR11669:SF9 - REPLICATION FACTOR C SUBUNIT 5 Genomic Order:  3916
Name:  ? Eucgr.F04342 Secondary Identifier:  ? PAC:32052870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04342 0.5kb upstream 0.5kb upstream 7249 true Chr06: 55942284-55949532 Eucalyptus grandis
Eucgr.F04342 0.5kb upstream 0.5kb upstream 500 false Chr06: 55949033-55949532 Eucalyptus grandis
Eucgr.F04342 0.5kb downstream 0.5kb downstream 7249 true Chr06: 55941784-55949032 Eucalyptus grandis
Eucgr.F04342 0.5kb downstream 0.5kb downstream 500 false Chr06: 55941784-55942283 Eucalyptus grandis
Eucgr.F04342 1.0kb upstream 1.0kb upstream 7749 true Chr06: 55942284-55950032 Eucalyptus grandis
Eucgr.F04342 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55949033-55950032 Eucalyptus grandis
Eucgr.F04342 1.0kb downstream 1.0kb downstream 7749 true Chr06: 55941284-55949032 Eucalyptus grandis
Eucgr.F04342 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55941284-55942283 Eucalyptus grandis
Eucgr.F04342 2.0kb upstream 2.0kb upstream 8749 true Chr06: 55942284-55951032 Eucalyptus grandis
Eucgr.F04342 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55949033-55951032 Eucalyptus grandis
Eucgr.F04342 2.0kb downstream 2.0kb downstream 8749 true Chr06: 55940284-55949032 Eucalyptus grandis
Eucgr.F04342 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55940284-55942283 Eucalyptus grandis
Eucgr.F04342 5.0kb upstream 5.0kb upstream 11749 true Chr06: 55942284-55954032 Eucalyptus grandis
Eucgr.F04342 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55949033-55954032 Eucalyptus grandis
Eucgr.F04342 5.0kb downstream 5.0kb downstream 11749 true Chr06: 55937284-55949032 Eucalyptus grandis
Eucgr.F04342 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55937284-55942283 Eucalyptus grandis
Eucgr.F04342 10.0kb upstream 10.0kb upstream 16749 true Chr06: 55942284-55959032 Eucalyptus grandis
Eucgr.F04342 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55949033-55959032 Eucalyptus grandis
Eucgr.F04342 10.0kb downstream 10.0kb downstream 16749 true Chr06: 55932284-55949032 Eucalyptus grandis
Eucgr.F04342 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55932284-55942283 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063888 5270 Rosid View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 164.664 0.0 516.201 High High
cufflinks 7.95229 0.0 20.1753   Low
cufflinks 115.113 0.0 341.437 High  
cufflinks 46.1622 0.0 119.973 High  
cufflinks 16.7477 0.0 42.2003    
cufflinks 98.9947 0.0 289.892 High  

0 Strain