Gene : Eucgr.F04348 E. grandis v2.0
Defline:  (1 of 2) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Genomic Order:  3922
Name:  ? Eucgr.F04348 Secondary Identifier:  ? PAC:32055722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04348 0.5kb upstream 0.5kb upstream 6004 true Chr06: 55990378-55996381 Eucalyptus grandis
Eucgr.F04348 0.5kb upstream 0.5kb upstream 500 false Chr06: 55990378-55990877 Eucalyptus grandis
Eucgr.F04348 0.5kb downstream 0.5kb downstream 6004 true Chr06: 55990878-55996881 Eucalyptus grandis
Eucgr.F04348 0.5kb downstream 0.5kb downstream 500 false Chr06: 55996382-55996881 Eucalyptus grandis
Eucgr.F04348 1.0kb upstream 1.0kb upstream 6504 true Chr06: 55989878-55996381 Eucalyptus grandis
Eucgr.F04348 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55989878-55990877 Eucalyptus grandis
Eucgr.F04348 1.0kb downstream 1.0kb downstream 6504 true Chr06: 55990878-55997381 Eucalyptus grandis
Eucgr.F04348 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55996382-55997381 Eucalyptus grandis
Eucgr.F04348 2.0kb upstream 2.0kb upstream 7504 true Chr06: 55988878-55996381 Eucalyptus grandis
Eucgr.F04348 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55988878-55990877 Eucalyptus grandis
Eucgr.F04348 2.0kb downstream 2.0kb downstream 7504 true Chr06: 55990878-55998381 Eucalyptus grandis
Eucgr.F04348 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55996382-55998381 Eucalyptus grandis
Eucgr.F04348 5.0kb upstream 5.0kb upstream 10504 true Chr06: 55985878-55996381 Eucalyptus grandis
Eucgr.F04348 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55985878-55990877 Eucalyptus grandis
Eucgr.F04348 5.0kb downstream 5.0kb downstream 10504 true Chr06: 55990878-56001381 Eucalyptus grandis
Eucgr.F04348 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55996382-56001381 Eucalyptus grandis
Eucgr.F04348 10.0kb upstream 10.0kb upstream 15504 true Chr06: 55980878-55996381 Eucalyptus grandis
Eucgr.F04348 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55980878-55990877 Eucalyptus grandis
Eucgr.F04348 10.0kb downstream 10.0kb downstream 15504 true Chr06: 55990878-56006381 Eucalyptus grandis
Eucgr.F04348 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55996382-56006381 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.9292 0.0 13.6844   High
cufflinks 2.32476 0.0 5.6318   Low
cufflinks 6.13041 0.0 14.0589   High
cufflinks 2.79209 0.0 6.59204    
cufflinks 3.78323 0.0 8.75234    
cufflinks 2.73501 0.0 6.55115    

0 Strain