Gene : Eucgr.F04207 E. grandis v2.0
Defline:  (1 of 1) PTHR12956//PTHR12956:SF17 - ALKALINE CERAMIDASE-RELATED Genomic Order:  3744
Name:  ? Eucgr.F04207 Secondary Identifier:  ? PAC:32053392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04207 0.5kb upstream 0.5kb upstream 3748 true Chr06: 52811538-52815285 Eucalyptus grandis
Eucgr.F04207 0.5kb upstream 0.5kb upstream 500 false Chr06: 52811538-52812037 Eucalyptus grandis
Eucgr.F04207 0.5kb downstream 0.5kb downstream 3748 true Chr06: 52812038-52815785 Eucalyptus grandis
Eucgr.F04207 0.5kb downstream 0.5kb downstream 500 false Chr06: 52815286-52815785 Eucalyptus grandis
Eucgr.F04207 1.0kb upstream 1.0kb upstream 4248 true Chr06: 52811038-52815285 Eucalyptus grandis
Eucgr.F04207 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52811038-52812037 Eucalyptus grandis
Eucgr.F04207 1.0kb downstream 1.0kb downstream 4248 true Chr06: 52812038-52816285 Eucalyptus grandis
Eucgr.F04207 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52815286-52816285 Eucalyptus grandis
Eucgr.F04207 2.0kb upstream 2.0kb upstream 5248 true Chr06: 52810038-52815285 Eucalyptus grandis
Eucgr.F04207 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52810038-52812037 Eucalyptus grandis
Eucgr.F04207 2.0kb downstream 2.0kb downstream 5248 true Chr06: 52812038-52817285 Eucalyptus grandis
Eucgr.F04207 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52815286-52817285 Eucalyptus grandis
Eucgr.F04207 5.0kb upstream 5.0kb upstream 8248 true Chr06: 52807038-52815285 Eucalyptus grandis
Eucgr.F04207 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52807038-52812037 Eucalyptus grandis
Eucgr.F04207 5.0kb downstream 5.0kb downstream 8248 true Chr06: 52812038-52820285 Eucalyptus grandis
Eucgr.F04207 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52815286-52820285 Eucalyptus grandis
Eucgr.F04207 10.0kb upstream 10.0kb upstream 13248 true Chr06: 52802038-52815285 Eucalyptus grandis
Eucgr.F04207 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52802038-52812037 Eucalyptus grandis
Eucgr.F04207 10.0kb downstream 10.0kb downstream 13248 true Chr06: 52812038-52825285 Eucalyptus grandis
Eucgr.F04207 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52815286-52825285 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043522 5273 Angiosperm View MSA
124064834 5270 Rosid View MSA
123741279 5271 Pentapetalae View MSA
122792528 5272 Eudicot View MSA
121343906 5274 Embryophyte View MSA
123379940 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53043 0.0 17.8211    
cufflinks 6.51322 0.0 15.6084    
cufflinks 8.73116 0.0 20.3883   High
cufflinks 8.0494 0.0 18.896    
cufflinks 6.52212 0.0 15.6517    
cufflinks 6.14515 0.0 14.8065   Low

0 Strain