Gene : Eucgr.F04230 E. grandis v2.0
Defline:  (1 of 1) PTHR21290//PTHR21290:SF32 - SPHINGOMYELIN SYNTHETASE Genomic Order:  3762
Name:  ? Eucgr.F04230 Secondary Identifier:  ? PAC:32052618
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04230 0.5kb upstream 0.5kb upstream 5794 true Chr06: 53018201-53023994 Eucalyptus grandis
Eucgr.F04230 0.5kb upstream 0.5kb upstream 500 false Chr06: 53023495-53023994 Eucalyptus grandis
Eucgr.F04230 0.5kb downstream 0.5kb downstream 5794 true Chr06: 53017701-53023494 Eucalyptus grandis
Eucgr.F04230 0.5kb downstream 0.5kb downstream 500 false Chr06: 53017701-53018200 Eucalyptus grandis
Eucgr.F04230 1.0kb upstream 1.0kb upstream 6294 true Chr06: 53018201-53024494 Eucalyptus grandis
Eucgr.F04230 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53023495-53024494 Eucalyptus grandis
Eucgr.F04230 1.0kb downstream 1.0kb downstream 6294 true Chr06: 53017201-53023494 Eucalyptus grandis
Eucgr.F04230 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53017201-53018200 Eucalyptus grandis
Eucgr.F04230 2.0kb upstream 2.0kb upstream 7294 true Chr06: 53018201-53025494 Eucalyptus grandis
Eucgr.F04230 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53023495-53025494 Eucalyptus grandis
Eucgr.F04230 2.0kb downstream 2.0kb downstream 7294 true Chr06: 53016201-53023494 Eucalyptus grandis
Eucgr.F04230 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53016201-53018200 Eucalyptus grandis
Eucgr.F04230 5.0kb upstream 5.0kb upstream 10294 true Chr06: 53018201-53028494 Eucalyptus grandis
Eucgr.F04230 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53023495-53028494 Eucalyptus grandis
Eucgr.F04230 5.0kb downstream 5.0kb downstream 10294 true Chr06: 53013201-53023494 Eucalyptus grandis
Eucgr.F04230 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53013201-53018200 Eucalyptus grandis
Eucgr.F04230 10.0kb upstream 10.0kb upstream 15294 true Chr06: 53018201-53033494 Eucalyptus grandis
Eucgr.F04230 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53023495-53033494 Eucalyptus grandis
Eucgr.F04230 10.0kb downstream 10.0kb downstream 15294 true Chr06: 53008201-53023494 Eucalyptus grandis
Eucgr.F04230 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53008201-53018200 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041514 5273 Angiosperm View MSA
124064312 5270 Rosid View MSA
123737084 5271 Pentapetalae View MSA
122786755 5272 Eudicot View MSA
121345949 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5097 0.0 29.1328    
cufflinks 21.2257 0.0 47.8746    
cufflinks 13.2842 0.0 30.8012    
cufflinks 27.2396 0.0 61.2541    
cufflinks 27.2302 0.0 68.0547    
cufflinks 7.02062 0.0 16.6324   Low

0 Strain