Gene : Eucgr.F04184 E. grandis v2.0
Defline:  (1 of 6) PTHR11751:SF126 - TRYPTOPHAN AMINOTRANSFERASE-RELATED PROTEIN 3-RELATED Genomic Order:  3723
Name:  ? Eucgr.F04184 Secondary Identifier:  ? PAC:32053043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04184 0.5kb upstream 0.5kb upstream 4794 true Chr06: 52614453-52619246 Eucalyptus grandis
Eucgr.F04184 0.5kb upstream 0.5kb upstream 500 false Chr06: 52614453-52614952 Eucalyptus grandis
Eucgr.F04184 0.5kb downstream 0.5kb downstream 4794 true Chr06: 52614953-52619746 Eucalyptus grandis
Eucgr.F04184 0.5kb downstream 0.5kb downstream 500 false Chr06: 52619247-52619746 Eucalyptus grandis
Eucgr.F04184 1.0kb upstream 1.0kb upstream 5294 true Chr06: 52613953-52619246 Eucalyptus grandis
Eucgr.F04184 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52613953-52614952 Eucalyptus grandis
Eucgr.F04184 1.0kb downstream 1.0kb downstream 5294 true Chr06: 52614953-52620246 Eucalyptus grandis
Eucgr.F04184 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52619247-52620246 Eucalyptus grandis
Eucgr.F04184 2.0kb upstream 2.0kb upstream 6294 true Chr06: 52612953-52619246 Eucalyptus grandis
Eucgr.F04184 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52612953-52614952 Eucalyptus grandis
Eucgr.F04184 2.0kb downstream 2.0kb downstream 6294 true Chr06: 52614953-52621246 Eucalyptus grandis
Eucgr.F04184 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52619247-52621246 Eucalyptus grandis
Eucgr.F04184 5.0kb upstream 5.0kb upstream 9294 true Chr06: 52609953-52619246 Eucalyptus grandis
Eucgr.F04184 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52609953-52614952 Eucalyptus grandis
Eucgr.F04184 5.0kb downstream 5.0kb downstream 9294 true Chr06: 52614953-52624246 Eucalyptus grandis
Eucgr.F04184 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52619247-52624246 Eucalyptus grandis
Eucgr.F04184 10.0kb upstream 10.0kb upstream 14294 true Chr06: 52604953-52619246 Eucalyptus grandis
Eucgr.F04184 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52604953-52614952 Eucalyptus grandis
Eucgr.F04184 10.0kb downstream 10.0kb downstream 14294 true Chr06: 52614953-52629246 Eucalyptus grandis
Eucgr.F04184 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52619247-52629246 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029689 5273 Angiosperm View MSA
124068463 5270 Rosid View MSA
123752024 5271 Pentapetalae View MSA
122788339 5272 Eudicot View MSA
121345504 5274 Embryophyte View MSA
123380229 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96616 0.0 9.78473    
cufflinks 8.0819 0.0 18.6372   High
cufflinks 3.70623 0.0 9.18684    
cufflinks 2.59555 0.0 6.65559    
cufflinks 1.37709 0.0 3.76245   Low
cufflinks 7.01259 0.0 16.3962    

0 Strain