Gene : Eucgr.F04163 E. grandis v2.0
Defline:  (1 of 27) PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE Genomic Order:  3705
Name:  ? Eucgr.F04163 Secondary Identifier:  ? PAC:32056712
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5466 Eucalyptus grandis pathologic  
Egrandis PWY-6824 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04163 0.5kb upstream 0.5kb upstream 4748 true Chr06: 52361453-52366200 Eucalyptus grandis
Eucgr.F04163 0.5kb upstream 0.5kb upstream 500 false Chr06: 52361453-52361952 Eucalyptus grandis
Eucgr.F04163 0.5kb downstream 0.5kb downstream 4748 true Chr06: 52361953-52366700 Eucalyptus grandis
Eucgr.F04163 0.5kb downstream 0.5kb downstream 500 false Chr06: 52366201-52366700 Eucalyptus grandis
Eucgr.F04163 1.0kb upstream 1.0kb upstream 5248 true Chr06: 52360953-52366200 Eucalyptus grandis
Eucgr.F04163 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52360953-52361952 Eucalyptus grandis
Eucgr.F04163 1.0kb downstream 1.0kb downstream 5248 true Chr06: 52361953-52367200 Eucalyptus grandis
Eucgr.F04163 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52366201-52367200 Eucalyptus grandis
Eucgr.F04163 2.0kb upstream 2.0kb upstream 6248 true Chr06: 52359953-52366200 Eucalyptus grandis
Eucgr.F04163 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52359953-52361952 Eucalyptus grandis
Eucgr.F04163 2.0kb downstream 2.0kb downstream 6248 true Chr06: 52361953-52368200 Eucalyptus grandis
Eucgr.F04163 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52366201-52368200 Eucalyptus grandis
Eucgr.F04163 5.0kb upstream 5.0kb upstream 9248 true Chr06: 52356953-52366200 Eucalyptus grandis
Eucgr.F04163 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52356953-52361952 Eucalyptus grandis
Eucgr.F04163 5.0kb downstream 5.0kb downstream 9248 true Chr06: 52361953-52371200 Eucalyptus grandis
Eucgr.F04163 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52366201-52371200 Eucalyptus grandis
Eucgr.F04163 10.0kb upstream 10.0kb upstream 14248 true Chr06: 52351953-52366200 Eucalyptus grandis
Eucgr.F04163 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52351953-52361952 Eucalyptus grandis
Eucgr.F04163 10.0kb downstream 10.0kb downstream 14248 true Chr06: 52361953-52376200 Eucalyptus grandis
Eucgr.F04163 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52366201-52376200 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031722 5273 Angiosperm View MSA
124072521 5270 Rosid View MSA
123628149 5271 Pentapetalae View MSA
122662445 5272 Eudicot View MSA
121300721 5274 Embryophyte View MSA
123338450 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08157 0.0 3.02121    
cufflinks 0.820329 0.0 2.35722    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.4312 0.0 6.29696   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain