Gene : Eucgr.F04171 E. grandis v2.0
Defline:  (1 of 2) PTHR24320:SF70 - PROTEIN DHS-24 Genomic Order:  3712
Name:  ? Eucgr.F04171 Secondary Identifier:  ? PAC:32056393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04171 0.5kb upstream 0.5kb upstream 5520 true Chr06: 52430104-52435623 Eucalyptus grandis
Eucgr.F04171 0.5kb upstream 0.5kb upstream 500 false Chr06: 52435124-52435623 Eucalyptus grandis
Eucgr.F04171 0.5kb downstream 0.5kb downstream 5520 true Chr06: 52429604-52435123 Eucalyptus grandis
Eucgr.F04171 0.5kb downstream 0.5kb downstream 500 false Chr06: 52429604-52430103 Eucalyptus grandis
Eucgr.F04171 1.0kb upstream 1.0kb upstream 6020 true Chr06: 52430104-52436123 Eucalyptus grandis
Eucgr.F04171 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52435124-52436123 Eucalyptus grandis
Eucgr.F04171 1.0kb downstream 1.0kb downstream 6020 true Chr06: 52429104-52435123 Eucalyptus grandis
Eucgr.F04171 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52429104-52430103 Eucalyptus grandis
Eucgr.F04171 2.0kb upstream 2.0kb upstream 7020 true Chr06: 52430104-52437123 Eucalyptus grandis
Eucgr.F04171 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52435124-52437123 Eucalyptus grandis
Eucgr.F04171 2.0kb downstream 2.0kb downstream 7020 true Chr06: 52428104-52435123 Eucalyptus grandis
Eucgr.F04171 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52428104-52430103 Eucalyptus grandis
Eucgr.F04171 5.0kb upstream 5.0kb upstream 10020 true Chr06: 52430104-52440123 Eucalyptus grandis
Eucgr.F04171 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52435124-52440123 Eucalyptus grandis
Eucgr.F04171 5.0kb downstream 5.0kb downstream 10020 true Chr06: 52425104-52435123 Eucalyptus grandis
Eucgr.F04171 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52425104-52430103 Eucalyptus grandis
Eucgr.F04171 10.0kb upstream 10.0kb upstream 15020 true Chr06: 52430104-52445123 Eucalyptus grandis
Eucgr.F04171 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52435124-52445123 Eucalyptus grandis
Eucgr.F04171 10.0kb downstream 10.0kb downstream 15020 true Chr06: 52420104-52435123 Eucalyptus grandis
Eucgr.F04171 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52420104-52430103 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063150 5270 Rosid View MSA
123750057 5271 Pentapetalae View MSA
122792913 5272 Eudicot View MSA
122043514 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121346273 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.97445 0.0 16.9065    
cufflinks 0.935794 0.0 2.76925   Low
cufflinks 6.23028 0.0 15.2237    
cufflinks 1.16397 0.0 3.35619    
cufflinks 1.32858 0.0 3.79855    
cufflinks 11.3463 0.0 26.358   High

0 Strain