Gene : Eucgr.F04134 E. grandis v2.0
Defline:  (1 of 3) PTHR23151//PTHR23151:SF61 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  3680
Name:  ? Eucgr.F04134 Secondary Identifier:  ? PAC:32054850
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5173 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PYRUVDEHYD-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04134 0.5kb upstream 0.5kb upstream 3204 true Chr06: 52012730-52015933 Eucalyptus grandis
Eucgr.F04134 0.5kb upstream 0.5kb upstream 500 false Chr06: 52015434-52015933 Eucalyptus grandis
Eucgr.F04134 0.5kb downstream 0.5kb downstream 3204 true Chr06: 52012230-52015433 Eucalyptus grandis
Eucgr.F04134 0.5kb downstream 0.5kb downstream 500 false Chr06: 52012230-52012729 Eucalyptus grandis
Eucgr.F04134 1.0kb upstream 1.0kb upstream 3704 true Chr06: 52012730-52016433 Eucalyptus grandis
Eucgr.F04134 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52015434-52016433 Eucalyptus grandis
Eucgr.F04134 1.0kb downstream 1.0kb downstream 3704 true Chr06: 52011730-52015433 Eucalyptus grandis
Eucgr.F04134 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52011730-52012729 Eucalyptus grandis
Eucgr.F04134 2.0kb upstream 2.0kb upstream 4704 true Chr06: 52012730-52017433 Eucalyptus grandis
Eucgr.F04134 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52015434-52017433 Eucalyptus grandis
Eucgr.F04134 2.0kb downstream 2.0kb downstream 4704 true Chr06: 52010730-52015433 Eucalyptus grandis
Eucgr.F04134 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52010730-52012729 Eucalyptus grandis
Eucgr.F04134 5.0kb upstream 5.0kb upstream 7704 true Chr06: 52012730-52020433 Eucalyptus grandis
Eucgr.F04134 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52015434-52020433 Eucalyptus grandis
Eucgr.F04134 5.0kb downstream 5.0kb downstream 7704 true Chr06: 52007730-52015433 Eucalyptus grandis
Eucgr.F04134 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52007730-52012729 Eucalyptus grandis
Eucgr.F04134 10.0kb upstream 10.0kb upstream 12704 true Chr06: 52012730-52025433 Eucalyptus grandis
Eucgr.F04134 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52015434-52025433 Eucalyptus grandis
Eucgr.F04134 10.0kb downstream 10.0kb downstream 12704 true Chr06: 52002730-52015433 Eucalyptus grandis
Eucgr.F04134 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52002730-52012729 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792286 5273 Angiosperm View MSA
124050764 5270 Rosid View MSA
123619885 5271 Pentapetalae View MSA
122797216 5272 Eudicot View MSA
121063528 5274 Embryophyte View MSA
123103270 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4458 0.0 28.1208    
cufflinks 11.8187 0.0 28.6924    
cufflinks 14.1638 0.0 33.9996    
cufflinks 13.7283 0.0 32.8903    
cufflinks 9.65354 0.0 24.0199   Low
cufflinks 21.7922 0.0 50.724   High

0 Strain